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H3-16-all-fractions_k255_4213748

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4213748_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2..1150)
DNA (1149bp) protein (383aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS7_NIAKG
Major facilitator transporter {ECO:0000313|EMBL:GAL85962.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
major facilitator superfamily protein
H3-16-all-fractions_k255_4213748_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1359..1694
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQ61_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92124.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
H3-16-all-fractions_k255_4213748_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1808..2077
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL85949.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_4213748_4
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2149..3156)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00035E37E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII53480.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
H3-16-all-fractions_k255_4213748_5
unknown

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comp(3366..3932)
DNA (567bp) protein (189aa)

This feature has no annotations

H3-16-all-fractions_k255_4213748_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4333..5526)
DNA (1194bp) protein (398aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
succinyl-CoA synthetase, subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta n=1 Tax=Pontibacter roseus RepID=UPI000366BFF8
H3-16-all-fractions_k255_4213748_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5671..6777
DNA (1107bp) protein (369aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
phosphonate-transporting ATPase (EC:3.6.3.28)
Lipoprotein releasing system ATP-binding protein LolD n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JP57_9BACT
H3-16-all-fractions_k255_4213748_8
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7021..7527
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EU34_EMTOG
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:GAL87763.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
H3-16-all-fractions_k255_4213748_9
unknown

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7641..7748
DNA (108bp) protein (36aa)

This feature has no annotations

H3-16-all-fractions_k255_4213748_10
unknown

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7871..8020
DNA (150bp) protein (50aa)

This feature has no annotations

H3-16-all-fractions_k255_4213748_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8073..8579
DNA (507bp) protein (169aa)
RNA polymerase sigma factor n=1 Tax=Spirosoma spitsbergense RepID=UPI0003601DA0
RNA polymerase sigma factor {ECO:0000313|EMBL:GAL87765.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
RNA polymerase sigma factor
H3-16-all-fractions_k255_4213748_12
unknown

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comp(8745..9068)
DNA (324bp) protein (108aa)

This feature has no annotations

H3-16-all-fractions_k255_4213748_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(9220..9564)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036A616D
Uncharacterized protein {ECO:0000313|EMBL:KIF33605.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
Displaying 13 items

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