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H3-16-all-fractions_k255_5810357

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5810357_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..230
DNA (228bp) protein (76aa)
Transposase, IS116/IS110/IS902 family (Fragment) n=1 Tax=Burkholderia cenocepacia BC7 RepID=U1Z4F0_9BURK
transposase
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ACA91594.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
H3-16-all-fractions_k255_5810357_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(333..1421)
DNA (1089bp) protein (363aa)
ATP-dependent DNA ligase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B57837
ATP dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ADW67481.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
H3-16-all-fractions_k255_5810357_3
unknown

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comp(1547..2608)
DNA (1062bp) protein (354aa)

This feature has no annotations

H3-16-all-fractions_k255_5810357_4

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2700..3650
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035FB834
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
xylose isomerase
H3-16-all-fractions_k255_5810357_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3659..6436)
DNA (2778bp) protein (926aa)
putative membrane associated hydrolase
hypothetical protein id=8266260 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-16-all-fractions_k255_5810357_6
RLO_PLX_64_10, Bacteria

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6693..8198
DNA (1506bp) protein (502aa)
beta-lactamase id=24407531 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
H3-16-all-fractions_k255_5810357_7
unknown

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8323..8613
DNA (291bp) protein (97aa)

This feature has no annotations

H3-16-all-fractions_k255_5810357_8
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9349..10104)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Thauera RepID=C4KDH2_THASP
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF83143.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
short chain dehydrogenase
H3-16-all-fractions_k255_5810357_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10269..10577
DNA (309bp) protein (103aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V8K9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91564.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10574..10816
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WTG6_MYCKA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91565.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10865..11152
DNA (288bp) protein (96aa)
Uncharacterized peroxidase-related enzyme n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5L9_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91566.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11159..14101)
DNA (2943bp) protein (981aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC16_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88768.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14136..14291)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9C3_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25550.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
H3-16-all-fractions_k255_5810357_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(14466..14957)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FACDF
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABJ83280.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_5810357_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14997..15374)
DNA (378bp) protein (126aa)
ArsR family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y260_SORCE
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AGP38566.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
H3-16-all-fractions_k255_5810357_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15552..15890
DNA (339bp) protein (113aa)
PadR family transcripitonal regulator n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FD212
transcriptional regulator, PadR-family
Transcriptional regulator, PadR-family {ECO:0000313|EMBL:AHG89808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15892..18603
DNA (2712bp) protein (904aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X61_SOLUE
permease
Permease {ECO:0000313|EMBL:AHG92300.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18925..19962
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000362FFA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88372.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19872..20768)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ITP3_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD08417.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
H3-16-all-fractions_k255_5810357_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20986..22932
DNA (1947bp) protein (649aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22972..23334
DNA (363bp) protein (121aa)
Transcriptional regulator, PadR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024H7_SOLUE
transcriptional regulator PadR family protein
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AHG91653.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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23331..25901
DNA (2571bp) protein (857aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024H6_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83600.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_5810357_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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26019..26750
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U4_GEMAT
protein of unknown function DUF305
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-16-all-fractions_k255_5810357_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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26892..28886
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003702B28
LVIVD repeat-containing protein
LVIVD repeat-containing protein {ECO:0000313|EMBL:AHG91658.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_5810357_25
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(28964..30232)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000379B8CD
ankyrin
Ankyrin {ECO:0000313|EMBL:ADV82187.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
H3-16-all-fractions_k255_5810357_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30557..33181
DNA (2625bp) protein (875aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X61_SOLUE
permease
Permease {ECO:0000313|EMBL:AHG89321.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 26 items

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