name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
H3-16-all-fractions_k255_8189230_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(361..2223)
----------------- DNA (1863bp) protein (621aa) |
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88205.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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H3-16-all-fractions_k255_8189230_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(2252..2911)
----------------- DNA (660bp) protein (220aa) |
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U4_GEMAT
protein of unknown function DUF305
Uncharacterized protein {ECO:0000313|EMBL:AHG88204.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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H3-16-all-fractions_k255_8189230_3
unknown
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Not on your lists |
3132..3719
----------------- DNA (588bp) protein (196aa) |
This feature has no annotations |
|
H3-16-all-fractions_k255_8189230_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
4348..6600
----------------- DNA (2253bp) protein (751aa) |
ABC transporter transmembrane region n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RX90_9DELT
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG92935.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC transporter transmembrane region
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H3-16-all-fractions_k255_8189230_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
6651..7142
----------------- DNA (492bp) protein (164aa) |
protein of unknown function DUF1854
Uncharacterized protein {ECO:0000313|EMBL:AHG92934.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein id=3896432 bin=GWF2_Lentisphaerae_52_8 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
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H3-16-all-fractions_k255_8189230_6
unknown
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Not on your lists |
comp(7367..7693)
----------------- DNA (327bp) protein (109aa) |
This feature has no annotations |
|
H3-16-all-fractions_k255_8189230_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(8080..8880)
----------------- DNA (801bp) protein (267aa) |
LytTr DNA-binding region
Two component transcriptional regulator, LytTR family id=2992326 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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H3-16-all-fractions_k255_8189230_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(8877..10808)
----------------- DNA (1932bp) protein (644aa) |
Signal transduction histidine kinase, LytS n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TZW6_9DELT
histidine kinase internal region
Histidine kinase internal region {ECO:0000313|EMBL:AHG93757.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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H3-16-all-fractions_k255_8189230_9
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11029..11961
----------------- DNA (933bp) protein (311aa) |
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA11_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:GAM96506.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
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H3-16-all-fractions_k255_8189230_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(11823..14510)
----------------- DNA (2688bp) protein (896aa) |
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380045C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
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H3-16-all-fractions_k255_8189230_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(14569..15246)
----------------- DNA (678bp) protein (226aa) |
Phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF12_MYXSD
phosphoribosyl-ATP diphosphatase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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H3-16-all-fractions_k255_8189230_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15250..16017)
----------------- DNA (768bp) protein (256aa) |
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZB9_9DELT
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H3-16-all-fractions_k255_8189230_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(16017..16565)
----------------- DNA (549bp) protein (183aa) |
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4L8_GEMAT
Imidazoleglycerol-phosphate dehydratase
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H3-16-all-fractions_k255_8189230_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(16593..17306)
----------------- DNA (714bp) protein (238aa) |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HIS4_GEMAT
1-(5-phosphoribosyl)-5-(5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
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H3-16-all-fractions_k255_8189230_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(17303..17944)
----------------- DNA (642bp) protein (214aa) |
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF05_MYXSD
Imidazole glycerol phosphate synthase subunit hisH
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H3-16-all-fractions_k255_8189230_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(17941..20442)
----------------- DNA (2502bp) protein (834aa) |
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|RuleBase:RU000580}; EC=1.1.1.23 {ECO:0000256|RuleBase:RU000580};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Histidinol dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M1_GEMAT
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H3-16-all-fractions_k255_8189230_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(20439..21317)
----------------- DNA (879bp) protein (293aa) |
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000255|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000255|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000255|HAMAP-Rule:MF_00079};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ATP phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HIS1_GEMAT
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H3-16-all-fractions_k255_8189230_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria
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Not on your lists |
21493..24504
----------------- DNA (3012bp) protein (1004aa) |
Peptidase S9, prolyl oligopeptidase active site domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S62_SOLUE
peptidase S9 prolyl oligopeptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
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H3-16-all-fractions_k255_8189230_19
unknown
|
Not on your lists |
comp(24515..25009)
----------------- DNA (495bp) protein (165aa) |
This feature has no annotations |
|
H3-16-all-fractions_k255_8189230_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria
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Not on your lists |
25248..26057
----------------- DNA (810bp) protein (270aa) |
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A994_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
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H3-16-all-fractions_k255_8189230_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria
|
Not on your lists |
26271..27413
----------------- DNA (1143bp) protein (381aa) |
O-succinylbenzoate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A995_GEMAT
o-succinylbenzoic acid (OSB) synthetase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
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H3-16-all-fractions_k255_8189230_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
27410..28618
----------------- DNA (1209bp) protein (403aa) |
Peptidase M20D family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A988_GEMAT
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG93497.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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H3-16-all-fractions_k255_8189230_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
29196..30560
----------------- DNA (1365bp) protein (455aa) |
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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H3-16-all-fractions_k255_8189230_24
unknown
|
Not on your lists |
30584..30844
----------------- DNA (261bp) protein (87aa) |
This feature has no annotations |
|
H3-16-all-fractions_k255_8189230_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(30916..31863)
----------------- DNA (948bp) protein (316aa) |
dppA; D-aminopeptidase (EC:3.4.11.-); K02035 peptide/nickel transport system substrate-binding protein id=12554608 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dppA; D-aminopeptidase (EC:3.4.11.-)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
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H3-16-all-fractions_k255_8189230_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31984..32445
----------------- DNA (462bp) protein (154aa) |
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSI5_9DELT
fbp; FKBP-type peptidylprolyl cis-trans isomerase
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H3-16-all-fractions_k255_8189230_27
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32453..32920
----------------- DNA (468bp) protein (156aa) |
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSI5_9DELT
fbp; FKBP-type peptidylprolyl cis-trans isomerase
|
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H3-16-all-fractions_k255_8189230_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
32935..34035
----------------- DNA (1101bp) protein (367aa) |
acsA; putative acetoacetyl-CoA synthetase (EC:6.2.1.16)
Putative acetoacetyl-CoA synthetase {ECO:0000313|EMBL:BAH39168.1}; EC=6.2.1.16 {ECO:0000313|EMBL:BAH39168.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative acetoacetyl-CoA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9J1_GEMAT
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H3-16-all-fractions_k255_8189230_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33995..34867
----------------- DNA (873bp) protein (291aa) |
acetoacetyl-CoA synthetase (EC:6.2.1.1)
Acetoacetyl-CoA synthase n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6BYD9_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
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H3-16-all-fractions_k255_8189230_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
34940..36064
----------------- DNA (1125bp) protein (375aa) |
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I8_GEMAT
4-hydroxyphenylpyruvate dioxygenase
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:AHG91240.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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