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H3-16-all-fractions_k255_1698304

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_1698304_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3..215
DNA (213bp) protein (71aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNZ0_9BACT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
H3-16-all-fractions_k255_1698304_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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295..906
DNA (612bp) protein (204aa)
Riboflavin synthase, alpha subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNY9_9BACT
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EEF58455.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
riboflavin synthase subunit alpha
H3-16-all-fractions_k255_1698304_3
unknown

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comp(903..1151)
DNA (249bp) protein (83aa)

This feature has no annotations

H3-16-all-fractions_k255_1698304_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1443..2108
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379C3CB
NarL family two component response regulator
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
H3-16-all-fractions_k255_1698304_5
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2444..2812
DNA (369bp) protein (123aa)
Response regulator receiver domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ08_SYNAS
response regulator receiver domain-containing protein
Response regulator receiver domain {ECO:0000313|EMBL:ABC75947.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
H3-16-all-fractions_k255_1698304_6
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2850..3488)
DNA (639bp) protein (213aa)
Response regulator n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD98_CHLTF
Nodulation protein W {ECO:0000313|EMBL:KJF74842.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
response regulator
H3-16-all-fractions_k255_1698304_7
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3485..5005)
DNA (1521bp) protein (507aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGT6_SYNFM
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
H3-16-all-fractions_k255_1698304_8
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

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comp(5105..5581)
DNA (477bp) protein (159aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RFL7_9CYAN
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFY55842.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
H3-16-all-fractions_k255_1698304_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5709..8252
DNA (2544bp) protein (848aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ATPase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRG1_9RHIZ
multi-sensor signal transduction multi-kinase
H3-16-all-fractions_k255_1698304_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8282..8695)
DNA (414bp) protein (138aa)
Transport-associated protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIN2_9BACT
Transport-associated protein {ECO:0000313|EMBL:EEF60295.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
H3-16-all-fractions_k255_1698304_11
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8894..9922)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030A7327
Uncharacterized protein {ECO:0000313|EMBL:CCM74497.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
H3-16-all-fractions_k255_1698304_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10106..11497)
DNA (1392bp) protein (464aa)
PA14 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL26_9BACT
PA14 domain protein {ECO:0000313|EMBL:EEF59520.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
cbp32B; carbohydrate binding protein
H3-16-all-fractions_k255_1698304_13
unknown

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11653..11712
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 13 items

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