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H3-16-all-fractions_k255_4038057

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4038057_1

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comp(25..468)
DNA (444bp) protein (148aa)
chemotaxis protein CheY n=1 Tax=Methylobacter marinus RepID=UPI00037F3451
Marine sediment metagenome DNA, contig: S01H1_L01648 {ECO:0000313|EMBL:GAF83266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver protein
H3-16-all-fractions_k255_4038057_2
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(494..2665)
DNA (2172bp) protein (724aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIR4_9BACT
PAS/PAC sensor signal transduction histidine kinase
Tax=RBG_13_Deltaproteobacteria_43_22_curated
H3-16-all-fractions_k255_4038057_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2845..3714
DNA (870bp) protein (290aa)
Aldehyde Dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ91_9BACT
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EEF58009.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
aldehyde dehydrogenase (NAD) family protein
H3-16-all-fractions_k255_4038057_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3792..4787
DNA (996bp) protein (332aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Malate dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ90_9BACT
malate dehydrogenase
H3-16-all-fractions_k255_4038057_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4820..5350
DNA (531bp) protein (177aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ89_9BACT
Displaying 5 items

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