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H3-16-all-fractions_k255_4062173

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4062173_1
unknown

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3..164
DNA (162bp) protein (54aa)

This feature has no annotations

H3-16-all-fractions_k255_4062173_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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326..1441
DNA (1116bp) protein (372aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGH9_9BACT
H3-16-all-fractions_k255_4062173_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1511..1783
DNA (273bp) protein (91aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ03_9BACT
exonuclease VII small subunit
H3-16-all-fractions_k255_4062173_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1785..3770
DNA (1986bp) protein (662aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ04_9BACT
H3-16-all-fractions_k255_4062173_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3973..5289
DNA (1317bp) protein (439aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ05_9BACT
NADP-dependent isocitrate dehydrogenase
H3-16-all-fractions_k255_4062173_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5369..6001)
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAV3_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF63138.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 subunit
H3-16-all-fractions_k255_4062173_7
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6065..6814
DNA (750bp) protein (250aa)
hypothetical protein, partial n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-I21 RepID=UPI000374CF77
FecR protein
FecR protein {ECO:0000313|EMBL:AEB08076.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
Displaying 7 items

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