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H3-16-all-fractions_k255_5067345

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5067345_1
unknown

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comp(46..408)
DNA (363bp) protein (121aa)

This feature has no annotations

H3-16-all-fractions_k255_5067345_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(645..2483)
DNA (1839bp) protein (613aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEF2_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF61666.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 factor
H3-16-all-fractions_k255_5067345_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2835..3074
DNA (240bp) protein (80aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQX4_9BACT
phosphoribosylformylglycinamidine synthase subunit PurS
H3-16-all-fractions_k255_5067345_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3157..3864
DNA (708bp) protein (236aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQX5_9BACT
phosphoribosylformylglycinamidine synthase I
H3-16-all-fractions_k255_5067345_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3866..4177
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62005.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter-like protein
H3-16-all-fractions_k255_5067345_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4174..6675
DNA (2502bp) protein (834aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoribosylglycinamide synthetase n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036BC5E1
phosphoribosylformylglycinamidine synthase
H3-16-all-fractions_k255_5067345_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6683..8812)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLR8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59175.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Zn-dependent protease with chaperone function
H3-16-all-fractions_k255_5067345_8
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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8989..10149
DNA (1161bp) protein (387aa)
Integrase catalytic region n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZV9_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated
H3-16-all-fractions_k255_5067345_9
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

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comp(10218..10982)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G358830_P01}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Zea.;" source="Zea mays (Maize).;"
H3-16-all-fractions_k255_5067345_10
unknown

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comp(11030..11641)
DNA (612bp) protein (204aa)

This feature has no annotations

Displaying 10 items

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