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H3-16-all-fractions_k255_5067345_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(645..2483)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEF2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 266.0
  • Bit_score: 316
  • Evalue 3.70e-83
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF61666.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 266.0
  • Bit_score: 316
  • Evalue 5.30e-83
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 288.0
  • Bit_score: 193
  • Evalue 1.80e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1839
ATGCCAGACCCGAATGACATTGCGTTATTGAAGCAATACGTTGACGAGAATTCCGAAGCCGCGTTCGCGGAGCTTGTCACGCGGCATGTCAACCTCGTTTATTCCGCAGCAATACGAAAAATTGGGAACGCCCATGCCGCGCAGGAAATATCGCAGGCGGTTTTCATTATTTTTGCGCGCAAGGCAAAATCGCTTGGCGCAAAGGCGATTCTTTCCGGCTGGTTTTATCAAACGACGCGATTAACGGCAGCGAATTATTTGCGGACGGAAATCCGCCGCCAAAAGCGAGAACAAGAGGCCTATATGCAAACAATTTTGAATGAATCGCAATCAGAGGAAGCGTGGTCGCAAGTCGCGCCGTTACTGGAAGACGCGATGGGACGTTTAGGCGACTGCGACCGAAACGCAATCGTGATGCGATTCTTTGAAAATAAAAGTTTGCAGGAAGTTGGGGCTGCCATCGGCTCAAGCGAAGATGCGGCAAAAATACGAATCAGTCGCGCACTTAAAAAATTGCAGAAGTTTTTTGTCAAACGCGGCGTATCTTCGACTGCGGCAACTCTTGCTGGGGCGATTTCCGCAAATTCCGTTCAGGCTGCACCGGCTTTACTGGCAAAAACTACAACCACCGTTGCGTTCGCCAAAGGCGCGACGGCTTCGGCTTCAACCTTAACCGTCATCAAAGGAGCATTGAAAATCATGGCATGGACAAAAGCAAAAACCGCAATCGTGGTTGGCATCAGCGTGCTGCTCGTGGCGGGAACAGCGGAGATGGCAGCCAACAAAACCAAAAATCACAGCGCTACGGGTGCTAAATATCCCAAGCCGTGGGCTTTTGTCGGGCGAGCCACACCGGAGAATGCGTTGCAATCATTTTTCTGGGCTGAAAGCCAGGGAGATTTGAAAGTGCTTCAGGACAGTTATTCTACTGAAACCTGGGCGGTCATCGCGGATTATGTCAGATCTCATCCGAAAGAATATCCCAATGGACTTTCTGTGTCAGCCAGCAACAGCGTCAGGACCGTCACTGCGTTTTATATTTTGAAACAGAGAACGGGTTCGGGCGGGCTTTTTCTGGATTTAAAAAGAGACGGCGGACTCGCAAACTCCTCCACAGTATTCCTGATGAAAATCGGTGGCGAATGGAAGTTGGGCGCTCCGGGAGATTCCAGCATTGATGATTCTATTTGGGATAAAGGACAAGCGGATACACGCCTTCTCGATAAGGCACCACACATTGTCAGAATTATCCCCGCAAAATTCTCAAATGCCGGTGGCTTGGCCACTACCGGCGATCAGAGAACTTTGGGCGTTGCCCGTTCACTTAGAGAACTGGTGGATATTGCTTACAAAAGCGATTTGTCACGGACTGCTTTTCCAGAGTCATTGCAATCTGGCAAATACGATGTTATCGCAAATCTTCCTGCTGGAAACGAAGCCGCGCTGCAAAATGAACTAAAAAGACAATTTGGCATTATTGCGCACCGTAAAATGGTCGCGACAAATGTTTTTTTCTTAAAGGTAAAAAATCCGAGCGCGCAGGGATTCAAACCGTCTGCACCTCAAGGTAACGGGTCATCGTCAAGTTCATCTCAAGGGCATTTCGAAGCGACCAACATGCACATGGCCTCGTTGATCAATAGTCTCGAAGGAAACCTTAGCGCGCCTGTCGTTGACCAAACTGGATTAAAAGGAAAATTCGACATGGATCTGACGTGGGATAGTCAAAATGATTCACAGTATGAAAATTTTAAACGGGCGATCGCCGACCAATTAGGACTTGAACTTATTCCCGGCACTGCGCCCGTGGAGTTTCTGATCGTCGAACAAGTAAATTGA
PROTEIN sequence
Length: 613
MPDPNDIALLKQYVDENSEAAFAELVTRHVNLVYSAAIRKIGNAHAAQEISQAVFIIFARKAKSLGAKAILSGWFYQTTRLTAANYLRTEIRRQKREQEAYMQTILNESQSEEAWSQVAPLLEDAMGRLGDCDRNAIVMRFFENKSLQEVGAAIGSSEDAAKIRISRALKKLQKFFVKRGVSSTAATLAGAISANSVQAAPALLAKTTTTVAFAKGATASASTLTVIKGALKIMAWTKAKTAIVVGISVLLVAGTAEMAANKTKNHSATGAKYPKPWAFVGRATPENALQSFFWAESQGDLKVLQDSYSTETWAVIADYVRSHPKEYPNGLSVSASNSVRTVTAFYILKQRTGSGGLFLDLKRDGGLANSSTVFLMKIGGEWKLGAPGDSSIDDSIWDKGQADTRLLDKAPHIVRIIPAKFSNAGGLATTGDQRTLGVARSLRELVDIAYKSDLSRTAFPESLQSGKYDVIANLPAGNEAALQNELKRQFGIIAHRKMVATNVFFLKVKNPSAQGFKPSAPQGNGSSSSSSQGHFEATNMHMASLINSLEGNLSAPVVDQTGLKGKFDMDLTWDSQNDSQYENFKRAIADQLGLELIPGTAPVEFLIVEQVN*