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H3-16-all-fractions_k255_6020219

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6020219_1
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..431)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZ47_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB34060.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
glycoside hydrolase
H3-16-all-fractions_k255_6020219_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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474..1256
DNA (783bp) protein (261aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLJ7_9BACT
7-carboxy-7-deazaguanine synthase
H3-16-all-fractions_k255_6020219_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1386..2798
DNA (1413bp) protein (471aa)
acetylornithine transaminase (EC:2.6.1.11)
Aminotransferase class-III n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLJ8_9BACT
Aminotransferase class-III {ECO:0000313|EMBL:EEF59246.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
H3-16-all-fractions_k255_6020219_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2800..3603
DNA (804bp) protein (268aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLJ9_9BACT
dimethyladenosine transferase
H3-16-all-fractions_k255_6020219_5
unknown

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3648..4487
DNA (840bp) protein (280aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4636..5166)
DNA (531bp) protein (177aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
CMP/dCMP deaminase zinc-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPM4_9BACT
zinc-binding CMP/dCMP deaminase
H3-16-all-fractions_k255_6020219_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5168..5695)
DNA (528bp) protein (176aa)
NUDIX hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPM5_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:EEF58253.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NUDIX hydrolase
H3-16-all-fractions_k255_6020219_8
unknown

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comp(5792..5983)
DNA (192bp) protein (64aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_9
unknown

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comp(5997..6395)
DNA (399bp) protein (133aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6717..6998)
DNA (282bp) protein (94aa)
Tax=RBG_16_Desulfobacca_60_12_curated
H3-16-all-fractions_k255_6020219_11
unknown

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comp(6995..7306)
DNA (312bp) protein (104aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_12
unknown

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comp(7376..7840)
DNA (465bp) protein (155aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_13
unknown

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comp(7837..8244)
DNA (408bp) protein (136aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_14
unknown

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8724..9986
DNA (1263bp) protein (421aa)

This feature has no annotations

H3-16-all-fractions_k255_6020219_15
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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10171..11274
DNA (1104bp) protein (368aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003781FB9
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KJU83810.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
H3-16-all-fractions_k255_6020219_16
unknown

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11330..11482
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 16 items

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