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H3-16-all-fractions_k255_8923515

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_8923515_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(112..825)
DNA (714bp) protein (238aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM92_9BACT
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EEF59085.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase FAD-binding domain-containing protein
H3-16-all-fractions_k255_8923515_2
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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960..1817
DNA (858bp) protein (286aa)
NADH-dependent ferredoxin:NADP+ oxidoreductase, beta subunit id=4786404 bin=GWC2_Chloroflexi_73_18 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
nfnB-2; ferredoxin-NADP(+) reductase subunit alpha
Tax=GWF2_Verrucomicrobia_62_7_curated
H3-16-all-fractions_k255_8923515_3
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1807..3216
DNA (1410bp) protein (470aa)
NADH-dependent ferredoxin:NADP+ oxidoreductase, alpha subunit id=4786403 bin=GWC2_Chloroflexi_73_18 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative oxidoreductase
Tax=GWF2_Verrucomicrobia_62_7_curated
H3-16-all-fractions_k255_8923515_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3282..4031
DNA (750bp) protein (250aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ribonuclease PH n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR69_9BACT
ribonuclease PH
H3-16-all-fractions_k255_8923515_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4086..4757
DNA (672bp) protein (224aa)
Phosphoglycerate mutase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR70_9BACT
Phosphoglycerate mutase {ECO:0000313|EMBL:EEF57683.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphoglycerate mutase
H3-16-all-fractions_k255_8923515_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4754..5758
DNA (1005bp) protein (335aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
(50S ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR71_9BACT
H3-16-all-fractions_k255_8923515_7
unknown

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5935..6099
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000375F453
H3-16-all-fractions_k255_8923515_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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6443..7375
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C826_9PLAN
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
H3-16-all-fractions_k255_8923515_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7664..7924)
DNA (261bp) protein (87aa)
Ribosomal protein S18 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR77_9BACT
Ribosomal protein S18 {ECO:0000313|EMBL:EEF57690.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsR; 30S ribosomal protein S18
H3-16-all-fractions_k255_8923515_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(7928..8095)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR78_9BACT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpmG; 50S ribosomal protein L33
H3-16-all-fractions_k255_8923515_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8099..8683)
DNA (585bp) protein (195aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR79_9BACT
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:EEF57692.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dksA; DnaK suppressor protein
H3-16-all-fractions_k255_8923515_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8851..9654)
DNA (804bp) protein (268aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
GTP cyclohydrolase FolE2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR80_9BACT
GTP cyclohydrolase I
H3-16-all-fractions_k255_8923515_13
unknown

Not on your lists

9778..10386
DNA (609bp) protein (203aa)

This feature has no annotations

H3-16-all-fractions_k255_8923515_14
unknown

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10562..10822
DNA (261bp) protein (87aa)

This feature has no annotations

H3-16-all-fractions_k255_8923515_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10823..11764
DNA (942bp) protein (314aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP51_9BACT
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EEF58407.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
endonuclease/exonuclease/phosphatase
H3-16-all-fractions_k255_8923515_16
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11780..12814)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein id=3811464 bin=GWF2_Lentisphaerae_49_21 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
H3-16-all-fractions_k255_8923515_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12918..13772)
DNA (855bp) protein (285aa)
Serine/threonine protein kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP56_9BACT
Serine/threonine protein kinase {ECO:0000313|EMBL:EEF58412.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
serine/threonine protein kinase
H3-16-all-fractions_k255_8923515_18
S_OP1_64_32, KB1, Bacteria

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comp(13904..15364)
DNA (1461bp) protein (487aa)
Ribonucleoside-triphosphate reductase id=4214136 bin=GWF2_Lentisphaerae_57_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nrdD; ribonucleoside-triphosphate reductase
Tax=S_OP1_64_32
H3-16-all-fractions_k255_8923515_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15480..16181
DNA (702bp) protein (234aa)
Abortive infection protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP57_9BACT
Abortive infection protein {ECO:0000313|EMBL:EEF58413.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 19 items

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