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H3-16-all-fractions_k255_3882453_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 294..1289

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 330.0
  • Bit_score: 589
  • Evalue 3.00e-165
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFK6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 330.0
  • Bit_score: 589
  • Evalue 2.10e-165
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 323.0
  • Bit_score: 445
  • Evalue 1.10e-122

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 996
ATGCCCAAGAGGTTGACCAAAGATGAGTCAACCGCCACAGATACCTACGCGAAATTCATCGCGGAACCATTTGAAACCGGCTACGGCCACACCGTCGGCAACTCGATTCGCCGCGTGCTCTTGAGTTCGCTCGAAGGCGCAGCCATCACCTCCATCAAGGTGGACGGCGCGATGCACGAATTCGCCACTGTCGAAGGCGTGGTGGAGGACGTGACCGACATCGTTTTGAACCTCAAGAAAGTGTTGTTCAAGGCGCACACGCGCGACCCGCAAACGCTGTTGCTCTCCGCCAACAAAGAAGGCGAAGTGACGGCAGCGGACATCCAGCTCAACCAGAACGTTGAACTGGTGAACCCGACCCAGCACATCTGCACGCTCGACAAGAAAAAGAAGTTCGAGATGGAGCTGGAAGTGAAGATCGGCCGCGGATTTTTGCCGGGCGACGAAAACAAGAAGCCCAACCAGGCCATCGGCGTGATCGCGATTGATTCGTTGTTCTCGCCGGTGACGCGCGTTCGTTACGGCGTGGAAAGCGCCCGTGTCGGCCAGCGCACGGACTACGATCGTTTGGTCCTCGAACTCTGGACTGACGGACGCATCTCGCCGGATGACGCGCTGACCCAGGCTTCAGCCATTCTGGCCCATCACCTCGATGTGTTTGTCGGCTACGACAAGAGCGCGGTGGAATTCGAAGAAGTTGTGGACAAGCAGGACGAAGAGAAGTCCAAGCTCAAGAAGCTGCTCAATATGAGCGTGAACGAACTCGAACTGAGCGTCCGCGCGGCGAATTGTTTGAACAACGCGAACATCACGACCGTCGGCCAATTGGCGATGAAAACCGAGAGCGAGATGCTCAAGTATCGCAACTTCGGCAAGAAGTCGTTGAACGAAATCAAGGACAAGCTCCAGGCGCTCGGGTTGTCGCTTGGGATGAGCTTTGAGCCTGATTTGCTCGACGCGCCCAAGGAAGATAATTCGGCGTTGCTCACCCGGTAA
PROTEIN sequence
Length: 332
MPKRLTKDESTATDTYAKFIAEPFETGYGHTVGNSIRRVLLSSLEGAAITSIKVDGAMHEFATVEGVVEDVTDIVLNLKKVLFKAHTRDPQTLLLSANKEGEVTAADIQLNQNVELVNPTQHICTLDKKKKFEMELEVKIGRGFLPGDENKKPNQAIGVIAIDSLFSPVTRVRYGVESARVGQRTDYDRLVLELWTDGRISPDDALTQASAILAHHLDVFVGYDKSAVEFEEVVDKQDEEKSKLKKLLNMSVNELELSVRAANCLNNANITTVGQLAMKTESEMLKYRNFGKKSLNEIKDKLQALGLSLGMSFEPDLLDAPKEDNSALLTR*