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H3-16-all-fractions_k255_3882453

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_3882453_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2..145
DNA (144bp) protein (48aa)
30S ribosomal protein S4 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFK7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S4
H3-16-all-fractions_k255_3882453_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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294..1289
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFK6_9BACT
rpoA; DNA-directed RNA polymerase subunit alpha
H3-16-all-fractions_k255_3882453_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1301..1786
DNA (486bp) protein (162aa)
50S ribosomal protein L17 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFK5_9BACT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplQ; 50S ribosomal protein L17
H3-16-all-fractions_k255_3882453_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1916..2764
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EEEC9
cytochrome c551/c552
Cytochrome c551/c552 {ECO:0000313|EMBL:AKD56293.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
H3-16-all-fractions_k255_3882453_5
unknown

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2827..3039
DNA (213bp) protein (71aa)

This feature has no annotations

H3-16-all-fractions_k255_3882453_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3116..3973
DNA (858bp) protein (286aa)
Putative heme-binding protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XT0_SOLUE
heme-binding protein
Putative heme-binding protein {ECO:0000313|EMBL:ABJ85535.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_3882453_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3970..5565
DNA (1596bp) protein (532aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XS9_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ85536.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_3882453_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5549..8353)
DNA (2805bp) protein (935aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003648053
Glycoside hydrolase, family 63 {ECO:0000313|EMBL:AHG93207.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glycoside hydrolase, family 63
H3-16-all-fractions_k255_3882453_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8560..9048
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58410.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
H3-16-all-fractions_k255_3882453_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9145..9804
DNA (660bp) protein (220aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAP9_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY16459.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase sigma-70 factor
H3-16-all-fractions_k255_3882453_11
RLO_PLX_64_10, Bacteria

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9870..10142
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=2480746 bin=GWC2_Proteo_65_14_Ab886 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
H3-16-all-fractions_k255_3882453_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10170..10976)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63067.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
H3-16-all-fractions_k255_3882453_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(11230..13137)
DNA (1908bp) protein (636aa)
Autotransporter-associated beta strand repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCZ2_9BACT
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:EEF62338.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
autotransporter
Displaying 13 items

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