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H3-16-all-fractions_k255_3265436

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_3265436_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
Putative NAD-binding domain 4 protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C6_9THEO
Putative NAD-binding domain 4 protein {ECO:0000313|EMBL:EEB76199.1}; UDP-glucose 4-epimerase {ECO:0000313|EMBL:KKC30203.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
NAD-dependent epimerase/dehydratase
H3-16-all-fractions_k255_3265436_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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528..1184
DNA (657bp) protein (219aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSM1_SOLCM
membrane-associated phospholipid phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
H3-16-all-fractions_k255_3265436_3
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1297..1674)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038221F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00076.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
H3-16-all-fractions_k255_3265436_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2026..2361
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00038015F4
Uncharacterized protein {ECO:0000313|EMBL:ELR69653.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
conserved membrane protein of unknown function
H3-16-all-fractions_k255_3265436_5
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2368..2823
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQ93_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69654.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
H3-16-all-fractions_k255_3265436_6
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2804..3484
DNA (681bp) protein (227aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEG2_9FLAO
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO97013.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
RNA polymerase subunit sigma-24
H3-16-all-fractions_k255_3265436_7
unknown

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3475..3693
DNA (219bp) protein (73aa)

This feature has no annotations

H3-16-all-fractions_k255_3265436_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3741..5780)
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037E20E3
WGS project CAIT00000000 data, contig 9 {ECO:0000313|EMBL:CCH56296.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
sodium/hydrogen exchanger
H3-16-all-fractions_k255_3265436_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5801..6358)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000381B9E9
Uncharacterized protein {ECO:0000313|EMBL:CCH56295.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
H3-16-all-fractions_k255_3265436_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6663..7511)
DNA (849bp) protein (283aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBE9_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW03449.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_3265436_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7637..9028)
DNA (1392bp) protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378DE64
integral membrane sensor signal transduction histidine kinase
H3-16-all-fractions_k255_3265436_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9030..9722)
DNA (693bp) protein (231aa)
PhoB family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI0003644C34
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW03452.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_3265436_13
unknown

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9857..10669
DNA (813bp) protein (271aa)

This feature has no annotations

H3-16-all-fractions_k255_3265436_14
unknown

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10682..10864
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 14 items

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