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H3-16-all-fractions_k255_4825960

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4825960_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1..735)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD55542.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
H3-16-all-fractions_k255_4825960_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(740..1186)
DNA (447bp) protein (149aa)
GPW/gp25 family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ5_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15146.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_4825960_3
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1189..1494)
DNA (306bp) protein (102aa)
Type VI secretion system protein EvpJ n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HYF2_9BACE
Type VI secretion system protein EvpJ {ECO:0000313|EMBL:CDB38231.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
PAAR repeat-containing protein
H3-16-all-fractions_k255_4825960_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1510..3258)
DNA (1749bp) protein (583aa)
Rhs element Vgr protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FF50_FLAJ1
Rhs element Vgr protein
Rhs element Vgr protein {ECO:0000313|EMBL:ABQ06172.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
H3-16-all-fractions_k255_4825960_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3261..3938)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ2_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD58486.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
H3-16-all-fractions_k255_4825960_6
unknown

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comp(3938..4108)
DNA (171bp) protein (57aa)

This feature has no annotations

H3-16-all-fractions_k255_4825960_7
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4111..4566)
DNA (456bp) protein (152aa)
Putative phage tail protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0Q8T8_DESAH
putative phage tail protein
Putative phage tail protein {ECO:0000313|EMBL:ACN14428.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
H3-16-all-fractions_k255_4825960_8
CG_Gallio_03, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4574..5005)
DNA (432bp) protein (144aa)
Conserved hypothetical phage tail region protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479Y9_DECAR
phage tail region protein
Tax=CG_Gallio_03
H3-16-all-fractions_k255_4825960_9
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5042..6493)
DNA (1452bp) protein (484aa)
phage tail sheath protein
Putative uncharacterized protein id=3983778 bin=GWF2_Geobacter_54_21 species=Saccharophagus degradans genus=Saccharophagus taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
H3-16-all-fractions_k255_4825960_10
unknown

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comp(6512..7249)
DNA (738bp) protein (246aa)

This feature has no annotations

H3-16-all-fractions_k255_4825960_11
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7194..7769)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI000368B3A8
Uncharacterized protein {ECO:0000313|EMBL:KJE39055.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
hypothetical protein
H3-16-all-fractions_k255_4825960_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7991..8671)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EKH7_RUNSL
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEI50460.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Displaying 12 items

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