ggKbase home page

H3-16-all-fractions_k255_7180506

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_7180506_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..843)
DNA (843bp) protein (281aa)
Inner-membrane translocator n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IUJ5_FRASU
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADP83680.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H3-16-all-fractions_k255_7180506_2
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(843..2342)
DNA (1500bp) protein (500aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IUJ6_FRASU
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADP83681.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H3-16-all-fractions_k255_7180506_3
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2396..3541)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PQW3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIF66997.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein
H3-16-all-fractions_k255_7180506_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3817..4323
DNA (507bp) protein (169aa)
MaoC-like protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV35_9CLOT
MaoC-like protein {ECO:0000313|EMBL:EEG57076.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
MaoC family dehydratase
H3-16-all-fractions_k255_7180506_5
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4754..5413)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CC223
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK27396.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
H3-16-all-fractions_k255_7180506_6
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5423..5989)
DNA (567bp) protein (189aa)
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2Z3N8_9ACTO
Alkylhydroperoxidase AhpD family core domain-containing protein {ECO:0000313|EMBL:EPD68800.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
H3-16-all-fractions_k255_7180506_7
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5989..6798)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5X0G3_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:ETW26601.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
hypothetical protein
H3-16-all-fractions_k255_7180506_8
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6795..9356)
DNA (2562bp) protein (854aa)
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily (Modular protein) id=7720641 bin=CNBR_ACT species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily (Modular protein) {ECO:0000313|EMBL:CCD96074.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
ABC transporter
H3-16-all-fractions_k255_7180506_9
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9353..10252)
DNA (900bp) protein (300aa)
Putative ABC branched chain amino acid family transporter, inner membrane subunit n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SPE9_9BRAD
Putative ABC branched chain amino acid family transporter, inner membrane subunit {ECO:0000313|EMBL:CCD96076.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
LivM; branched-chain amino acid ABC transporter
H3-16-all-fractions_k255_7180506_10
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10260..11492)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 PF0_9BRAD">RepID=H0SPF0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD96077.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
extracellular ligand-binding receptor
H3-16-all-fractions_k255_7180506_11
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11489..12421)
DNA (933bp) protein (311aa)
Probable 3-hydroxybutyryl-CoA dehydrogenase FadB3 n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P129_9RHOB
putative 3-hydroxyacyl-CoA dehydrogenase
Tax=BJP_IG2158_Rhodobacterales_64_37
H3-16-all-fractions_k255_7180506_12
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12399..13169)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Glaciecola RepID=F4ATU0_GLAS4
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEE23414.1}; TaxID=983545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola sp. (strain 4H-3-7+YE-5).;"
H3-16-all-fractions_k255_7180506_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13169..13513)
DNA (345bp) protein (115aa)
Cupin 2 domain-containing protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z0Z0_9ALTE
cupin 2 barrel domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
H3-16-all-fractions_k255_7180506_14
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13513..14343)
DNA (831bp) protein (277aa)
mtf:TBFG_11731 hypothetical protein id=1245437 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cyclase
Cyclase {ECO:0000313|EMBL:EPZ18206.1}; TaxID=1353275 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus V06705.;"
H3-16-all-fractions_k255_7180506_15
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14457..15218
DNA (762bp) protein (254aa)
Putative transcriptional regulatory protein n=3 Tax=Mycobacterium canettii RepID=G0TKJ6_MYCCP
Putative transcriptional regulatory protein
Putative transcriptional regulatory protein {ECO:0000313|EMBL:CCC44062.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
H3-16-all-fractions_k255_7180506_16
unknown

Not on your lists

15411..15581
DNA (171bp) protein (57aa)

This feature has no annotations

H3-16-all-fractions_k255_7180506_17
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15980..19273)
DNA (3294bp) protein (1098aa)
Transcriptional activator domain n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T164_MICAI
transcriptional activator domain-containing protein
Transcriptional activator domain {ECO:0000313|EMBL:ADL47391.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
H3-16-all-fractions_k255_7180506_18
unknown

Not on your lists

19416..19718
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 18 items

View Taxonomy