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H3-18-all-fractions_k255_2129686

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_2129686_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

H3-18-all-fractions_k255_2129686_2
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(175..882)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000362445E
Copper-binding protein {ECO:0000313|EMBL:KKD08574.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
Hypothetical protein
H3-18-all-fractions_k255_2129686_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(969..1877)
DNA (909bp) protein (303aa)
copper-binding protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036B85C0
copper binding protein of plastocyanin/azurin family
Copper binding protein of plastocyanin/azurin family {ECO:0000313|EMBL:AHH96442.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H3-18-all-fractions_k255_2129686_4
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1991..3568)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KC08_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST29675.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
H3-18-all-fractions_k255_2129686_5
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

comp(3565..4059)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YHH1_BRAFL
Putative uncharacterized protein {ECO:0000313|EMBL:EEN59958.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
N-acetylmuramidase
H3-18-all-fractions_k255_2129686_6
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4499..4915
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V095_MYCVA
Uncharacterized protein {ECO:0000313|EMBL:KGN35801.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
H3-18-all-fractions_k255_2129686_7
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5354..6367)
DNA (1014bp) protein (338aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:ABL80869.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ABL80869.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
adenosine deaminase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037C57B9
H3-18-all-fractions_k255_2129686_8
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6377..7102)
DNA (726bp) protein (242aa)
DSBA oxidoreductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGD2_NOCSJ
DSBA oxidoreductase
Putative membrane protein {ECO:0000313|EMBL:AIY16782.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_2129686_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7102..7587)
DNA (486bp) protein (162aa)
DoxX family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGD1_NOCSJ
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ABL80866.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_2129686_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7664..8302
DNA (639bp) protein (213aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Oligoribonuclease n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGD0_NOCSJ
oligoribonuclease
H3-18-all-fractions_k255_2129686_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8452..9321)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037452B2
hypothetical protein
Putative secreted hydrolase {ECO:0000313|EMBL:AIY19070.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_2129686_12
unknown

Not on your lists

9432..9914
DNA (483bp) protein (161aa)

This feature has no annotations

H3-18-all-fractions_k255_2129686_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9922..10923)
DNA (1002bp) protein (334aa)
Pirin domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGC0_NOCSJ
pirin
Putative chromosome condensation protein {ECO:0000313|EMBL:AIY16778.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_2129686_14
unknown

Not on your lists

comp(10962..11339)
DNA (378bp) protein (126aa)

This feature has no annotations

H3-18-all-fractions_k255_2129686_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11458..13032
DNA (1575bp) protein (525aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB8_NOCSJ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABL80853.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_2129686_16
unknown

Not on your lists

comp(13196..13426)
DNA (231bp) protein (77aa)

This feature has no annotations

H3-18-all-fractions_k255_2129686_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13623..14834
DNA (1212bp) protein (404aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY19371.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_2129686_18
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14960..16501
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Salinispora arenicola (strain CNS-205) RepID=A8LZQ4_SALAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV97917.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
H3-18-all-fractions_k255_2129686_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16571..18619
DNA (2049bp) protein (683aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB9_NOCSJ
H3-18-all-fractions_k255_2129686_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18616..19680
DNA (1065bp) protein (355aa)
Adenine-specific methyltransferase {ECO:0000313|EMBL:AIY18307.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AIY18307.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
DNA methyltransferase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255DEEC
DNA methyltransferase
H3-18-all-fractions_k255_2129686_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19671..20021)
DNA (351bp) protein (117aa)
10 kDa chaperonin n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB1_NOCSJ
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|RuleBase:RU000535}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_2129686_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20031..20276)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80845.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_2129686_23
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20338..20811
DNA (474bp) protein (158aa)
peroxiredoxin n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003818273
Peroxiredoxin {ECO:0000313|EMBL:KJR09456.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
redoxin domain-containing protein
H3-18-all-fractions_k255_2129686_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20970..21608)
DNA (639bp) protein (213aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037E7B42
purine NTP phosphatase
H3-18-all-fractions_k255_2129686_25
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21610..22335)
DNA (726bp) protein (242aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Nocardioides sp. CF8 RepID=R7XZW0_9ACTO
H3-18-all-fractions_k255_2129686_26

Not on your lists

comp(22406..23188)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B30035
ABC-2 family transporter protein {ECO:0000313|EMBL:AIA15151.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
H3-18-all-fractions_k255_2129686_27
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23185..24099)
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SD70_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ83173.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
ABC transporter-like protein
H3-18-all-fractions_k255_2129686_28
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24231..25391
DNA (1161bp) protein (387aa)
Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG98_NOCSJ
histidine kinase, dimerisation and phosphoacceptor region
Histidine kinase, dimerization and phosphoacceptor region {ECO:0000313|EMBL:ABL80833.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_2129686_29
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25379..26056
DNA (678bp) protein (226aa)
Response regulator receiver n=1 Tax=Nocardioides sp. CF8 RepID=R7Y051_9ACTO
LuxR family transcriptional regulator
Putative two-component system response regulator {ECO:0000313|EMBL:AIY16756.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Displaying 29 items

View Taxonomy