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H3-18-all-fractions_k255_3716713

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_3716713_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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166..828
DNA (663bp) protein (221aa)
MOSC domain containing protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHW8_NOCSJ
MOSC domain-containing protein
MOSC domain containing protein {ECO:0000313|EMBL:ABL81403.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3716713_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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912..2759
DNA (1848bp) protein (616aa)
AMP-dependent synthetase and ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYA9_9ACTO
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EON24357.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
AMP-dependent synthetase and ligase
H3-18-all-fractions_k255_3716713_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2812..4011
DNA (1200bp) protein (400aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ADB31476.1}; EC=1.3.99.22 {ECO:0000313|EMBL:ADB31476.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PV10_KRIFD
H3-18-all-fractions_k255_3716713_4
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4032..4910
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJM7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP98582.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
H3-18-all-fractions_k255_3716713_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4915..5757)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHX5_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81410.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3716713_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5848..6681
DNA (834bp) protein (278aa)
Membrane protein {ECO:0000313|EMBL:AJR18238.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
membrane protein id=4357914 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein
H3-18-all-fractions_k255_3716713_7
unknown

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comp(6685..7854)
DNA (1170bp) protein (390aa)

This feature has no annotations

H3-18-all-fractions_k255_3716713_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(7851..8351)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000369A9A7
sigE; RNA polymerase sigma-E factor
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CCG01183.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
H3-18-all-fractions_k255_3716713_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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8529..9185
DNA (657bp) protein (219aa)
Transcriptional regulator, PadR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQM2_NOCSJ
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABL84107.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3716713_10
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9185..9577
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Corynebacterium mastitidis RepID=UPI00036B70BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN18361.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
H3-18-all-fractions_k255_3716713_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9574..10428)
DNA (855bp) protein (285aa)
Beta-lactamase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHX7_NOCSJ
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABL81412.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3716713_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10513..11535
DNA (1023bp) protein (341aa)
HrcA family transcriptional regulator n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B5C1F
HrcA family transcriptional regulator
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_3716713_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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11546..12703
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHX9_NOCSJ
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3716713_14
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12700..13434
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2U3_9ACTO
16S ribosomal RNA methyltransferase RsmE
H3-18-all-fractions_k255_3716713_15
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13629..13853)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C4N2_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY18111.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Displaying 15 items

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