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H3-18-all-fractions_k255_4597367

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_4597367_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..471
DNA (471bp) protein (157aa)
Translation initiation factor IF-3 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJH8_NOCSJ
translation initiation factor 3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_4597367_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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488..682
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Nocardioides sp. CF8 RepID=R7XSC2_9ACTO
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
50S ribosomal protein L35
H3-18-all-fractions_k255_4597367_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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715..1098
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000367F468
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
rplT; 50S ribosomal protein L20
H3-18-all-fractions_k255_4597367_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1101..1919
DNA (819bp) protein (273aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Nocardioides sp. CF8 RepID=R7XSF5_9ACTO
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:EON22233.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
RNA methyltransferase
H3-18-all-fractions_k255_4597367_5
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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1916..2137
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W4T9_KINRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS01828.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
H3-18-all-fractions_k255_4597367_6
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2130..2306
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SF42_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFQ82127.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
H3-18-all-fractions_k255_4597367_7
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2341..3369
DNA (1029bp) protein (343aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003761F59
ATPase domain-containing protein
H3-18-all-fractions_k255_4597367_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3472..4593
DNA (1122bp) protein (374aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJI4_NOCSJ
H3-18-all-fractions_k255_4597367_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4598..7075
DNA (2478bp) protein (826aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJI5_NOCSJ
H3-18-all-fractions_k255_4597367_10
unknown

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comp(7086..7742)
DNA (657bp) protein (219aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Actinomyces graevenitzii F0530 RepID=U1PVJ7_9ACTO
H3-18-all-fractions_k255_4597367_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7915..8955
DNA (1041bp) protein (347aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJI7_NOCSJ
H3-18-all-fractions_k255_4597367_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8952..9359
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSA5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIY19900.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
H3-18-all-fractions_k255_4597367_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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9375..10526
DNA (1152bp) protein (384aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Nocardioides sp. CF8 RepID=R7XSA0_9ACTO
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H3-18-all-fractions_k255_4597367_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10523..11461
DNA (939bp) protein (313aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000255|HAMAP-Rule:MF_00082}; Short=AGK {ECO:0000255|HAMAP-Rule:MF_00082};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
acetylglutamate kinase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037EE841
H3-18-all-fractions_k255_4597367_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11458..12651
DNA (1194bp) protein (398aa)
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Acetylornithine aminotransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJJ0_NOCSJ
H3-18-all-fractions_k255_4597367_16
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12648..13583
DNA (936bp) protein (312aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003667A0C
H3-18-all-fractions_k255_4597367_17
unknown

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13580..13699
DNA (120bp) protein (40aa)
arginine repressor n=1 Tax=Kribbella catacumbae RepID=UPI0003651C55
Displaying 17 items

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