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H3-18-all-fractions_k255_5873388

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_5873388_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..498)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HMC3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14157.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
H3-18-all-fractions_k255_5873388_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

606..1397
DNA (792bp) protein (264aa)
Two-component system, regulatory protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TPE2_9MICO
two component transcriptional regulator, LuxR family
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_3
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1430..2320)
DNA (891bp) protein (297aa)
Type II secretion system F domain n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8T3_INTC7
type II secretion system F domain
Type II secretion system F domain {ECO:0000313|EMBL:ADU47052.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
H3-18-all-fractions_k255_5873388_4
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2325..4181)
DNA (1857bp) protein (619aa)
Putative type II secretion system integral membrane subunit n=1 Tax=Rhodococcus equi (strain 103S) RepID=E4WG55_RHOE1
type ii secretion system integral membrane subunit
Putative type II secretion system integral membrane subunit {ECO:0000313|EMBL:CBH47909.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
H3-18-all-fractions_k255_5873388_5
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4178..5554)
DNA (1377bp) protein (459aa)
Type II secretion system protein E n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLD3_NOCSJ
CpaF pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:KGN32346.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
type II secretion system protein E
H3-18-all-fractions_k255_5873388_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5551..6711)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036C5AA3
Chromosome partitioning protein {ECO:0000313|EMBL:EWT07635.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cobyrinic acid a,c-diamide synthase
H3-18-all-fractions_k255_5873388_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6701..7489)
DNA (789bp) protein (263aa)
Tax=CG_Solirubrobact_01
H3-18-all-fractions_k255_5873388_8
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7504..8445)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EAX48036.1}; Flags: Precursor;; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
hypothetical protein
H3-18-all-fractions_k255_5873388_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8442..8882)
DNA (441bp) protein (147aa)
TadE family protein id=3778928 bin=GWC2_Clostridiales_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
TadE family protein
Tax=CG_Solirubrobact_01
H3-18-all-fractions_k255_5873388_10
unknown

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comp(8948..9154)
DNA (207bp) protein (69aa)

This feature has no annotations

H3-18-all-fractions_k255_5873388_11

Not on your lists

9327..9686
DNA (360bp) protein (120aa)
Marine sediment metagenome DNA, contig: S01H1_C00819 {ECO:0000313|EMBL:GAF82997.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative secreted protein
Putative uncharacterized protein id=2300189 bin=GWA2_Elusimicrobia_66_18 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
H3-18-all-fractions_k255_5873388_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9683..10222
DNA (540bp) protein (180aa)
Leader peptidase (Prepilin peptidase) n=1 Tax=Patulibacter medicamentivorans RepID=H0EC51_9ACTN
peptidase A24A-like protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10263..10952)
DNA (690bp) protein (230aa)
Folate-binding protein YgfZ n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H151_GLUDA
glycine cleavage system protein T
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11021..11632
DNA (612bp) protein (204aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3T1_9FIRM
molybdopterin binding oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11877..13508)
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Patulibacter medicamentivorans RepID=H0E7G5_9ACTN
chaperonin GroEL
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13527..13844)
DNA (318bp) protein (106aa)
10 kDa chaperonin n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2T1_CONWI
chaperonin Cpn10
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_17
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13973..14410
DNA (438bp) protein (146aa)
NUDIX hydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INT1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KFE67117.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
NUDIX hydrolase
H3-18-all-fractions_k255_5873388_18
unknown

Not on your lists

14407..14721
DNA (315bp) protein (105aa)

This feature has no annotations

H3-18-all-fractions_k255_5873388_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14727..15086
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B4F1E3
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15087..15488)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADE8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36408.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
H3-18-all-fractions_k255_5873388_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15485..15757)
DNA (273bp) protein (91aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_5873388_22
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15795..16841
DNA (1047bp) protein (349aa)
pdhA; pyruvate dehydrogenase (Lipoamide) E1 component alpha chain (EC:1.2.4.1)
Pyruvate dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3IML4_9PLAN
Pyruvate dehydrogenase {ECO:0000313|EMBL:GAB62959.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
H3-18-all-fractions_k255_5873388_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

16841..17809
DNA (969bp) protein (323aa)
Transketolase central region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAB0_CONWI
transketolase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
H3-18-all-fractions_k255_5873388_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17819..19273
DNA (1455bp) protein (485aa)
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase {ECO:0000313|EMBL:ABJ81913.1}; EC=2.3.1.61 {ECO:0000313|EMBL:ABJ81913.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365A2B2
H3-18-all-fractions_k255_5873388_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19281..19712
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00037393B0
Uncharacterized protein {ECO:0000313|EMBL:AHE56254.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
H3-18-all-fractions_k255_5873388_26
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19764..21701)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FSJ5_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK42083.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H3-18-all-fractions_k255_5873388_27
unknown

Not on your lists

21801..22127
DNA (327bp) protein (109aa)

This feature has no annotations

H3-18-all-fractions_k255_5873388_28
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22150..22863
DNA (714bp) protein (238aa)
lipoate--protein ligase (EC:2.3.1.181)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218471}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218470};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;"
Octanoyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=F8I2V9_SULAT
H3-18-all-fractions_k255_5873388_29
unknown

Not on your lists

comp(22878..23099)
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 29 items

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