ggKbase home page

H3-18-all-fractions_k255_6177787

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_6177787_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

H3-18-all-fractions_k255_6177787_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73..852)
DNA (780bp) protein (260aa)
phosphomethylpyrimidine kinase type-2 (EC:2.7.4.7)
Phosphomethylpyrimidine kinase type-2 {ECO:0000313|EMBL:ABG05705.1}; EC=2.7.4.7 {ECO:0000313|EMBL:ABG05705.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
phosphomethylpyrimidine kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B63B1E
H3-18-all-fractions_k255_6177787_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

957..3200
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0P2_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3208..5547)
DNA (2340bp) protein (780aa)
ATP-dependent DNA ligase family protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LY41_GRAFK
ATP-dependent DNA ligase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_5
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5548..6423)
DNA (876bp) protein (292aa)
Probable DNA repair protein DealDRAFT_1118 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF59_9FIRM
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
Ku protein
H3-18-all-fractions_k255_6177787_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6666..7598)
DNA (933bp) protein (311aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) RepID=ACCA_THET8
acetyl-CoA carboxylase carboxyltransferase subunit alpha
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7588..8436)
DNA (849bp) protein (283aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha id=2457140 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8463..9239)
DNA (777bp) protein (259aa)
arginase (EC:3.5.3.1)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI000349841F
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_9
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(9367..10308)
DNA (942bp) protein (314aa)
putative acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0S9_ANATU
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
H3-18-all-fractions_k255_6177787_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10268..10909)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003810D37
HAD family hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10932..12203)
DNA (1272bp) protein (424aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Paenibacillus lactis 154 RepID=G4HLU4_9BACL
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12204..12932)
DNA (729bp) protein (243aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Oscillibacter RepID=U2RR51_9FIRM
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12925..13860)
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH81_RHOM4
malonyl CoA-acyl carrier protein transacylase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13857..14858)
DNA (1002bp) protein (334aa)
3-oxoacyl-ACP synthase n=1 Tax=Cohnella laeviribosi RepID=UPI00037CD23D
3-oxoacyl-ACP synthase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-18-all-fractions_k255_6177787_15
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14855..15298)
DNA (444bp) protein (148aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1053248 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM034.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=2 Tax=Bacillus cereus RepID=J8NPJ4_BACCE
fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
H3-18-all-fractions_k255_6177787_16
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15317..15907
DNA (591bp) protein (197aa)
birA; biotin [acetyl-CoA carboxylase] synthetase; transcriptional repressor of the biotin operon (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XLK6_9BACL
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" source="Paenisporosarcina sp. HGH0030.;"
H3-18-all-fractions_k255_6177787_17
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15882..17933)
DNA (2052bp) protein (684aa)
N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRY1_ACIC1
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:ABK52191.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
H3-18-all-fractions_k255_6177787_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18029..19288
DNA (1260bp) protein (420aa)
Putative protease/transporter id=5010016 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
H3-18-all-fractions_k255_6177787_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19298..20065
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035E7B87
mechanosensory protein 2
Tax=RBG_16_Actinobacteria_64_13_curated
H3-18-all-fractions_k255_6177787_20
Thermotoga maritima, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20196..20846
DNA (651bp) protein (217aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AGL49823.1}; EC=2.7.7.10 {ECO:0000313|EMBL:AGL49823.1};; Galactose-1-phosphate uridylyltransferase, putative {ECO:0000313|EMBL:AAD35977.1}; TaxID=243274 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099).;"
Galactose-1-phosphate uridylyltransferase n=2 Tax=Thermotoga RepID=Q9WZZ8_THEMA
galactose-1-phosphate uridylyltransferase
H3-18-all-fractions_k255_6177787_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20843..21127)
DNA (285bp) protein (95aa)
Tax=RBG_16_Actinobacteria_67_10_curated
H3-18-all-fractions_k255_6177787_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(21283..22917)
DNA (1635bp) protein (545aa)
DNA gyrase subunit alpha (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Patulibacter medicamentivorans RepID=H0E9I9_9ACTN
Tax=RBG_16_Actinobacteria_64_13_curated
Displaying 22 items

View Taxonomy