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H3-18-all-fractions_k255_3844936

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_3844936_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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165..1577
DNA (1413bp) protein (471aa)
RNA helicase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031C4810
RNA helicase {ECO:0000313|EMBL:KJC60569.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
DEAD/DEAH box helicase
H3-18-all-fractions_k255_3844936_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1602..1886
DNA (285bp) protein (95aa)
Translation initiation factor IF-1 n=2 Tax=Bradyrhizobiaceae RepID=F7QIU2_9BRAD
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
infA; translation initiation factor IF-1
H3-18-all-fractions_k255_3844936_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2161..2367
DNA (207bp) protein (69aa)
Cold shock protein CspA n=10 Tax=Bradyrhizobiaceae RepID=B6JJC2_OLICO
cspA1; cold shock protein CspA
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABA03578.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
H3-18-all-fractions_k255_3844936_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2492..3136)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F55C7
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46922.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
H3-18-all-fractions_k255_3844936_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3145..3705)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030FF4F1
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46674.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
H3-18-all-fractions_k255_3844936_6
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3819..4628)
DNA (810bp) protein (270aa)
Pilus assembly protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G0D6_9BRAD
ctpC; pilus assembly protein
Pilus assembly protein {ECO:0000313|EMBL:BAL74223.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
H3-18-all-fractions_k255_3844936_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5167..5334
DNA (168bp) protein (56aa)
Flp/Fap pilin component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR62_NITHX
Flp/Fap pilin component
Pilus assembly protein {ECO:0000313|EMBL:KJC60561.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
H3-18-all-fractions_k255_3844936_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5652..6176
DNA (525bp) protein (175aa)
Pilus assembly protein prepilin peptidase subunit n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DIN7_BRAJP
peptidase
Prepilin peptidase CpaA {ECO:0000313|EMBL:AHY56771.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
H3-18-all-fractions_k255_3844936_9
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6285..6536
DNA (252bp) protein (84aa)
CtpC protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003687EED
putative pilus assembly protein, CpaB
Putative pilus assembly protein, CpaB {ECO:0000313|EMBL:BAM92573.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
H3-18-all-fractions_k255_3844936_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6578..8008
DNA (1431bp) protein (477aa)
Pilus assembly protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89UH8_BRADU
ctpD; pilus assembly protein
Pilus assembly protein {ECO:0000313|EMBL:BAC46704.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
H3-18-all-fractions_k255_3844936_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8018..8770
DNA (753bp) protein (251aa)
Pilus (Caulobacter type) biogenesis lipoprotein CpaD n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ILX4_9BRAD
Pilus assembly protein {ECO:0000313|EMBL:KJC60649.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ctpE; pilus assembly protein
H3-18-all-fractions_k255_3844936_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8767..10029
DNA (1263bp) protein (421aa)
Pilus assembly protein CpaE n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIR1_9BRAD
Pilus assembly protein CpaE {ECO:0000313|EMBL:ERF83625.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
pilus assembly protein CpaE
H3-18-all-fractions_k255_3844936_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10051..11514
DNA (1464bp) protein (488aa)
Pilus assembly protein CpaF n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HGQ8_9BRAD
Pilus assembly protein CpaF {ECO:0000313|EMBL:ERF83626.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ctpG; pilus assembly protein
H3-18-all-fractions_k255_3844936_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11526..12500
DNA (975bp) protein (325aa)
Tight adherence protein B n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H1M0_9BRAD
Tight adherence protein B {ECO:0000313|EMBL:ERF83627.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
pilus assembly protein membrane protein
H3-18-all-fractions_k255_3844936_15
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12511..12732
DNA (222bp) protein (74aa)
Pilus assemble protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89UI3_BRADU
ctpI; pilus assemble protein
Pilus assemble protein {ECO:0000313|EMBL:BAR55924.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
Displaying 15 items

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