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H3-18-all-fractions_k255_1657120

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_1657120_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..1259)
DNA (1257bp) protein (419aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV4_KORVE
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM65663.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Fis family transcriptional regulator
H3-18-all-fractions_k255_1657120_2
unknown

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comp(1259..1426)
DNA (168bp) protein (56aa)

This feature has no annotations

H3-18-all-fractions_k255_1657120_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1444..3819)
DNA (2376bp) protein (792aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
histidine kinase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7AAC6
histidine kinase
H3-18-all-fractions_k255_1657120_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3982..4944
DNA (963bp) protein (321aa)
Protease, CAAX amino terminal family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1F6_ACIC5
Predicted metal-dependent membrane protease {ECO:0000313|EMBL:CDM65665.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
protease, CAAX amino terminal family
H3-18-all-fractions_k255_1657120_5
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4988..5953
DNA (966bp) protein (322aa)
hypothetical protein n=11 Tax=unclassified candidate division KSB1 RepID=UPI000370CAA2
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
H3-18-all-fractions_k255_1657120_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6030..7181)
DNA (1152bp) protein (384aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLW3_THEM7
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_1657120_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7279..8079)
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65667.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein id=4047544 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
H3-18-all-fractions_k255_1657120_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8245..9333)
DNA (1089bp) protein (363aa)
Putative peptidoglycan binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE68_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65668.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_1657120_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9704..10921
DNA (1218bp) protein (406aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cysteine desulfurase n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI000369E66D
cysteine desulfurase NifS
H3-18-all-fractions_k255_1657120_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10975..11370
DNA (396bp) protein (132aa)
Nitrogen fixation protein NifU n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJG0_9DELT
Iron-sulfur cluster biosynthesis protein, NifU-like protein {ECO:0000313|EMBL:CDM65670.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative iron sulfur cluster assembly protein
H3-18-all-fractions_k255_1657120_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(11523..14288)
DNA (2766bp) protein (922aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:CDM65989.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM65989.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGV5_CHLTF
H3-18-all-fractions_k255_1657120_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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14555..15559
DNA (1005bp) protein (335aa)
potassium uptake protein, TrkA family id=14425772 bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
TrkA-N domain-containing protein
Tax=CSP1_2_Dadabacteria
H3-18-all-fractions_k255_1657120_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15655..16743
DNA (1089bp) protein (363aa)
Lipopolysaccharide heptosyltransferase II n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK17_CHLTF
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:CDM65987.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipopolysaccharide heptosyltransferase II
H3-18-all-fractions_k255_1657120_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16740..17321
DNA (582bp) protein (194aa)
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:CDM65986.1}; EC=3.1.3.82 {ECO:0000313|EMBL:CDM65986.1};; EC=3.1.3.83 {ECO:0000313|EMBL:CDM65986.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS6_CHLTF
H3-18-all-fractions_k255_1657120_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17339..18355
DNA (1017bp) protein (339aa)
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase (EC:2.7.7.-)
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJH3_CHLTF
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase {ECO:0000313|EMBL:CDM65985.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_1657120_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18449..18955
DNA (507bp) protein (169aa)
Cytidyltransferase-related domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC4_CHLTF
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:CDM65984.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytidyltransferase-related domain-containing protein
H3-18-all-fractions_k255_1657120_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19086..20168
DNA (1083bp) protein (361aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA7_CHLTF
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:CDM65983.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ADP-heptose--LPS heptosyltransferase
H3-18-all-fractions_k255_1657120_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20158..20730
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGF9_CHLTF
Phospholipid methyltransferase {ECO:0000313|EMBL:CDM65982.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phospholipid methyltransferase
H3-18-all-fractions_k255_1657120_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20760..21683
DNA (924bp) protein (308aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65981.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_1657120_20
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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21830..24304
DNA (2475bp) protein (825aa)
rca:Rcas_0812 glycoside hydrolase family protein id=19709 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
glycoside hydrolase family protein
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
H3-18-all-fractions_k255_1657120_21
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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24331..25068
DNA (738bp) protein (246aa)
glgB; glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000255|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000255|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000255|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000255|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000255|HAMAP-Rule:MF_00685}; Short=BE {ECO:0000255|HAMAP-Rule:MF_00685};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=GLGB_MYXXD
Displaying 21 items

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