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H3-18-all-fractions_k255_2594052

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_2594052_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(3..269)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJR4_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP13081.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
H3-18-all-fractions_k255_2594052_2
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

341..1147
DNA (807bp) protein (269aa)
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWJ8_SYNAS
Tax=GWA2_Ignavibacteria_54_16_curated
H3-18-all-fractions_k255_2594052_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1148..1510)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSE0_SORCE
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHG89402.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2594052_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1556..2104)
DNA (549bp) protein (183aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000256|SAAS:SAAS00005567};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BE74_MEISD
peptide methionine sulfoxide reductase
H3-18-all-fractions_k255_2594052_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2435..3361
DNA (927bp) protein (309aa)
Beta-lactamase class A {ECO:0000313|EMBL:CDM65023.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CDM65023.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Beta-lactamase class A n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D6A5_SINAD
beta-lactamase class A
H3-18-all-fractions_k255_2594052_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3447..4901
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F305_SORC5
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG89198.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2594052_7
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4934..5254
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2G1B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW36289.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
H3-18-all-fractions_k255_2594052_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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5495..6127
DNA (633bp) protein (211aa)
RNA polymerase sigma factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK33_CHLTF
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
H3-18-all-fractions_k255_2594052_9
unknown

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6127..7239
DNA (1113bp) protein (371aa)

This feature has no annotations

H3-18-all-fractions_k255_2594052_10
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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7330..8670
DNA (1341bp) protein (447aa)
hypothetical protein id=24447314 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PBS lyase
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
H3-18-all-fractions_k255_2594052_11

Not on your lists

9007..10188
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E3FD
Marine sediment metagenome DNA, contig: S12H4_L00458 {ECO:0000313|EMBL:GAI75834.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PBS lyase
H3-18-all-fractions_k255_2594052_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10349..10840
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptide deformylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN4_CHLTF
peptide deformylase
H3-18-all-fractions_k255_2594052_13
unknown

Not on your lists

10855..11349
DNA (495bp) protein (165aa)

This feature has no annotations

H3-18-all-fractions_k255_2594052_14
RLO_PLX_64_10, Bacteria

Not on your lists

11462..12682
DNA (1221bp) protein (407aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=uncultured bacterium RepID=K2A3F5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
H3-18-all-fractions_k255_2594052_15
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12696..13130)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A1A8_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ67673.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
H3-18-all-fractions_k255_2594052_16
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13233..14885)
DNA (1653bp) protein (551aa)
Trehalose synthase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBW4_MYXSD
trehalose synthase
Trehalose synthase {ECO:0000313|EMBL:KFE70232.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
H3-18-all-fractions_k255_2594052_17

Not on your lists

15209..16852
DNA (1644bp) protein (548aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49324.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pyrrolo-quinoline quinone id=2435239 bin=GWF1_Spirochaetes_51_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
pyrrolo-quinoline quinone
H3-18-all-fractions_k255_2594052_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17149..17979
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT70_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39930.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H3-18-all-fractions_k255_2594052_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18121..23055
DNA (4935bp) protein (1645aa)
Alpha-2-macroglobulin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT69_KORVE
alpha-2-macroglobulin-like protein
Alpha-2-macroglobulin-like protein {ECO:0000313|EMBL:ABF39931.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H3-18-all-fractions_k255_2594052_20
unknown

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23193..24077
DNA (885bp) protein (295aa)

This feature has no annotations

H3-18-all-fractions_k255_2594052_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

24087..24992
DNA (906bp) protein (302aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
H3-18-all-fractions_k255_2594052_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25054..25554
DNA (501bp) protein (167aa)
Penicillin-binding protein, transpeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT66_KORVE
penicillin-binding protein, transpeptidase
Penicillin-binding protein, transpeptidase {ECO:0000313|EMBL:ABF39934.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 22 items

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