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H3-18-all-fractions_k255_2718114

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_2718114_1
unknown

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comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

H3-18-all-fractions_k255_2718114_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(314..1882)
DNA (1569bp) protein (523aa)
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
H3-18-all-fractions_k255_2718114_3
Dermacoccus nishinomiyaensis, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2168..3484)
DNA (1317bp) protein (439aa)
translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1274 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus nishinomiyaensis.;"
H3-18-all-fractions_k255_2718114_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3648..4595)
DNA (948bp) protein (316aa)
Sigma-24, ECF subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II52_KORVE
ECF subfamily RNA polymerase sigma-24 factor
Sigma-24, ECF subfamily {ECO:0000313|EMBL:ABF43448.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H3-18-all-fractions_k255_2718114_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4754..5398
DNA (645bp) protein (215aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9W6_9BACT
putative radical-activating enzyme, radical SAM superfamily
H3-18-all-fractions_k255_2718114_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5483..6292
DNA (810bp) protein (270aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
7-cyano-7-deazaguanine synthase id=4468226 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
queuosine biosynthesis protein QueC
H3-18-all-fractions_k255_2718114_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6432..7736
DNA (1305bp) protein (435aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65944.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_2718114_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8028..9809
DNA (1782bp) protein (594aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI3_CHLTF
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:CDM65588.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
type IV-A pilus assembly ATPase PilB
H3-18-all-fractions_k255_2718114_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9815..10738
DNA (924bp) protein (308aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65589.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_2718114_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10777..11991
DNA (1215bp) protein (405aa)
Pilus retraction protein PilT n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI4_CHLTF
Pilus retraction protein PilT {ECO:0000313|EMBL:CDM65590.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pilus retraction protein PilT
H3-18-all-fractions_k255_2718114_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12112..13344
DNA (1233bp) protein (411aa)
Type II secretory pathway, component PulF n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI5_CHLTF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:CDM65591.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
type II secretory pathway subunit PulF
H3-18-all-fractions_k255_2718114_12
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14865..15539
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y558_NITMU
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
H3-18-all-fractions_k255_2718114_13
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

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16177..17874
DNA (1698bp) protein (566aa)
Integrase catalytic region n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9Y092_STAC7
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:AFZ38250.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
H3-18-all-fractions_k255_2718114_14
unknown

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17881..18870
DNA (990bp) protein (330aa)

This feature has no annotations

H3-18-all-fractions_k255_2718114_15
unknown

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18815..20950
DNA (2136bp) protein (712aa)

This feature has no annotations

H3-18-all-fractions_k255_2718114_16
unknown

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comp(20990..21775)
DNA (786bp) protein (262aa)

This feature has no annotations

H3-18-all-fractions_k255_2718114_17
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21888..22892
DNA (1005bp) protein (335aa)
Tyrosine recombinase XerC n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZFR5_9GAMM
tyrosine recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium valvarum F0432.;"
H3-18-all-fractions_k255_2718114_18
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22944..23738)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS72325.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
H3-18-all-fractions_k255_2718114_19
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23788..24033)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GE03_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKQ67207.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein
H3-18-all-fractions_k255_2718114_20
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24307..25434)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003605ACB
restriction endonuclease
Tax=RBG_16_Desulfobacca_58_9_curated
H3-18-all-fractions_k255_2718114_21
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25998..28133
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD166 RepID=J8KWG0_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR73637.1}; TaxID=1053240 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD166.;"
pega domain protein
H3-18-all-fractions_k255_2718114_22
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

28164..29201
DNA (1038bp) protein (346aa)
Tax=CG_Arma_01
H3-18-all-fractions_k255_2718114_23
unknown

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29191..30924
DNA (1734bp) protein (578aa)

This feature has no annotations

H3-18-all-fractions_k255_2718114_24

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31610..32404
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036D8E41
Marine sediment metagenome DNA, contig: S01H1_S09861 {ECO:0000313|EMBL:GAG10203.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
site specific recombinase
H3-18-all-fractions_k255_2718114_25
unknown

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comp(32542..32787)
DNA (246bp) protein (82aa)

This feature has no annotations

H3-18-all-fractions_k255_2718114_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(32908..34125)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIB2_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87962.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2718114_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(34186..35406)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87963.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2718114_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

35747..36964
DNA (1218bp) protein (406aa)
Molybdenum cofactor synthesis domain {ECO:0000313|EMBL:CDM65564.1}; EC=2.10.1.1 {ECO:0000313|EMBL:CDM65564.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
molybdenum cofactor biosynthesis protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B430D7
molybdopterin molybdochelatase
H3-18-all-fractions_k255_2718114_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

37018..37491
DNA (474bp) protein (158aa)
Cyclic pyranopterin monophosphate synthase subunit MoaC {ECO:0000313|EMBL:CDM65025.1}; EC=4.1.99.18 {ECO:0000313|EMBL:CDM65025.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z1_CONWI
molybdenum cofactor biosynthesis protein C
H3-18-all-fractions_k255_2718114_30
unknown

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comp(37659..38039)
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying 30 items

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