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H3-18-all-fractions_k255_4532737

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_4532737_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

352..1929
DNA (1578bp) protein (526aa)
Nitrogenase (Molybdenum-iron)-specific transcriptional regulator NifA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PL86_9DELT
Nif-specific regulatory protein {ECO:0000313|EMBL:CDM64027.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Nif-specific regulatory protein
H3-18-all-fractions_k255_4532737_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1954..2787)
DNA (834bp) protein (278aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=RNC_MAGSM
H3-18-all-fractions_k255_4532737_3
unknown

Not on your lists

comp(2904..4118)
DNA (1215bp) protein (405aa)

This feature has no annotations

H3-18-all-fractions_k255_4532737_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4599..6314)
DNA (1716bp) protein (572aa)
Peptidase n=1 Tax=uncultured bacterium BLR5 RepID=B5L5W8_9BACT
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDM66376.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell division protein FtsI/penicillin-binding protein 2
H3-18-all-fractions_k255_4532737_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6737..8257
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Signal transduction histidine kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF5_CHLTF
signal transduction histidine kinase
H3-18-all-fractions_k255_4532737_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8271..9719
DNA (1449bp) protein (483aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFQ0_CHLTF
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM66378.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
two component, sigma54 specific, Fis family transcriptional regulator
H3-18-all-fractions_k255_4532737_7
unknown

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9802..10356
DNA (555bp) protein (185aa)

This feature has no annotations

H3-18-all-fractions_k255_4532737_8
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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10474..11475
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ID51_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO80883.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
H3-18-all-fractions_k255_4532737_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11541..12110
DNA (570bp) protein (190aa)
Thiol:disulfide interchange protein id=2466569 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
thioredoxin
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
H3-18-all-fractions_k255_4532737_10
unknown

Not on your lists

12122..12352
DNA (231bp) protein (77aa)

This feature has no annotations

H3-18-all-fractions_k255_4532737_11
unknown

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comp(12491..12772)
DNA (282bp) protein (94aa)

This feature has no annotations

H3-18-all-fractions_k255_4532737_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12795..13451)
DNA (657bp) protein (219aa)
Cna B-type protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKS4_KORVE
Carboxypeptidase regulatory-like domain {ECO:0000313|EMBL:CDM66381.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cna B-type protein
H3-18-all-fractions_k255_4532737_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13676..14752
DNA (1077bp) protein (359aa)
Mg-chelatase subunit ChlD n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFF5_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66382.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Mg-chelatase subunit ChlD
H3-18-all-fractions_k255_4532737_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14879..15073)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ4_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66383.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_4532737_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15298..16098)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI16_CHLTF
SH3 domain-containing protein {ECO:0000313|EMBL:CDM66384.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_4532737_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16306..16866)
DNA (561bp) protein (187aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037BF125
crossover junction endodeoxyribonuclease RuvC
H3-18-all-fractions_k255_4532737_17
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17214..17975
DNA (762bp) protein (254aa)
Putative peptidoglycan binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XCF3_9BURK
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EFF75533.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
hypothetical protein
H3-18-all-fractions_k255_4532737_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18093..18836)
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein HGMM_F55E10C24 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ26_9BACT
Probable transcriptional regulatory protein PYK22_02415 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_4532737_19
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(18993..19337)
DNA (345bp) protein (115aa)
UPF0235 protein Ctha_0036 n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSB7_CHLT3
hypothetical protein
UPF0235 protein Ctha_0036 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
H3-18-all-fractions_k255_4532737_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19337..19927)
DNA (591bp) protein (197aa)
Integral membrane protein YggT, involved in response to extracytoplasmic stress (Osmotic shock) n=2 Tax=Morganella morganii RepID=J7TMA0_MORMO
Predicted integral membrane protein {ECO:0000313|EMBL:CDM66388.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
H3-18-all-fractions_k255_4532737_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19972..20556)
DNA (585bp) protein (195aa)
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:CDM66389.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein id=2091685 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
pyridoxal phosphate enzyme, YggS family
H3-18-all-fractions_k255_4532737_22
unknown

Not on your lists

comp(20575..20664)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 22 items

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