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H3-18-all-fractions_k255_5243199

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_5243199_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

2..2710
DNA (2709bp) protein (903aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPU4_PERMH
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
H3-18-all-fractions_k255_5243199_2

Not on your lists

2798..4066
DNA (1269bp) protein (423aa)
Glycosyl hydrolase family 5 protein n=1 Tax=uncultured bacterium RepID=R9UKL7_9BACT
Glycosyl hydrolase family 5 protein {ECO:0000313|EMBL:AGN70391.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Endoglucanase
H3-18-all-fractions_k255_5243199_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4249..5850)
DNA (1602bp) protein (534aa)
Radical SAM domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V42_SOLUE
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABJ86473.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-18-all-fractions_k255_5243199_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6052..7545
DNA (1494bp) protein (498aa)
Amine oxidase, flavin-containing n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D2N7_MYXXD
amine oxidase
Amine oxidase {ECO:0000313|EMBL:AHG88948.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5243199_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7552..8373)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003618488
glycoside hydrolase family 16
Glycoside hydrolase family 16 {ECO:0000313|EMBL:AHG93162.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5243199_6
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(8509..9432)
DNA (924bp) protein (308aa)
Sucraseferredoxin family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5T2_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
H3-18-all-fractions_k255_5243199_7
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9425..10792)
DNA (1368bp) protein (456aa)
Cupin n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SYK9_AMYOR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG77938.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
H3-18-all-fractions_k255_5243199_8
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

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comp(10789..11202)
DNA (414bp) protein (138aa)
PREDICTED: dentin sialophosphoprotein-like n=1 Tax=Cricetulus griseus RepID=UPI00022F6FCB
Dentin sialophosphoprotein {ECO:0000313|EMBL:EGW15008.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Cricetinae; Cricetulus.;" source="Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).;"
hypothetical protein
H3-18-all-fractions_k255_5243199_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11469..13403)
DNA (1935bp) protein (645aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase,Response regulator receiver domain protein,histidine kinase {ECO:0000313|EMBL:CDM65576.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multi-sensor signal transduction histidine kinase id=14626073 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
H3-18-all-fractions_k255_5243199_10
unknown

Not on your lists

comp(13685..14269)
DNA (585bp) protein (195aa)

This feature has no annotations

H3-18-all-fractions_k255_5243199_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15002..16543)
DNA (1542bp) protein (514aa)
Periplasmic serine protease, Do/DeqQ family {ECO:0000313|EMBL:CDM66410.1}; EC=3.4.21.- {ECO:0000313|EMBL:CDM66410.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Protease Do n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UD7_SOLUE
protease Do
H3-18-all-fractions_k255_5243199_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16720..18414
DNA (1695bp) protein (565aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PAS domain S-box protein (EC:2.7.13.3)
PAS domain S-box n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFY2_CHLTF
H3-18-all-fractions_k255_5243199_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18448..19869
DNA (1422bp) protein (474aa)
Response regulator HsfA n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJT0_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM65572.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
two component, sigma54 specific, Fis family transcriptional regulator
H3-18-all-fractions_k255_5243199_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20263..20739
DNA (477bp) protein (159aa)
Prepilin-type N-terminal cleavage/methylation domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD85_CHLTF
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDM65570.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
H3-18-all-fractions_k255_5243199_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20992..21477
DNA (486bp) protein (162aa)
Prepilin-type N-terminal cleavage/methylation domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD85_CHLTF
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDM65570.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
H3-18-all-fractions_k255_5243199_16
unknown

Not on your lists

21578..23698
DNA (2121bp) protein (707aa)

This feature has no annotations

H3-18-all-fractions_k255_5243199_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

23695..24612
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE31_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11093.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
H3-18-all-fractions_k255_5243199_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

24609..25580
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC5_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM65567.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_5243199_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

25719..26672
DNA (954bp) protein (318aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD4_CHLTF
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CDM65566.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multidrug ABC transporter ATPase
H3-18-all-fractions_k255_5243199_20
unknown

Not on your lists

comp(26779..27414)
DNA (636bp) protein (212aa)

This feature has no annotations

H3-18-all-fractions_k255_5243199_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27498..29897)
DNA (2400bp) protein (800aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VND7_9CYAN
PAS domain S-box
H3-18-all-fractions_k255_5243199_22
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29925..30428)
DNA (504bp) protein (168aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
Signal transduction histidine kinase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13ZW4_BURXL
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
H3-18-all-fractions_k255_5243199_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(30628..31062)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00036BAFCE
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:CDM66616.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PAS domain S-box
H3-18-all-fractions_k255_5243199_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

31204..31890
DNA (687bp) protein (229aa)
Sensor histidine kinase / response regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8T2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CDM66615.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_5243199_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

31918..33390
DNA (1473bp) protein (491aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM66614.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC id=14625783 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
H3-18-all-fractions_k255_5243199_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(33497..33871)
DNA (375bp) protein (125aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJC8_CHLTF
H3-18-all-fractions_k255_5243199_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(33963..35975)
DNA (2013bp) protein (671aa)
DNA helicase, Rad3 {ECO:0000313|EMBL:CDM64401.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDM64401.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003603ECB
helicase c2
H3-18-all-fractions_k255_5243199_28
unknown

Not on your lists

comp(36139..36279)
DNA (141bp) protein (47aa)

This feature has no annotations

H3-18-all-fractions_k255_5243199_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(36461..37762)
DNA (1302bp) protein (434aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD86_CHLTF
H3-18-all-fractions_k255_5243199_30
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37978..39126
DNA (1149bp) protein (383aa)
Glr2547 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHI8_GLOVI
Interphotoreceptor retinoid-binding protein {ECO:0000313|EMBL:KFE62390.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
interphotoreceptor retinoid-binding protein
Displaying items 1-30 of 58 in total

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