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H3-18-all-fractions_k255_5733314

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_5733314_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2..223
DNA (222bp) protein (74aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acsA; acetate--CoA ligase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase id=2753927 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
H3-18-all-fractions_k255_5733314_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

380..760
DNA (381bp) protein (127aa)
PilZ domain-containing protein {ECO:0000313|EMBL:CDM64070.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_5733314_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

775..2052
DNA (1278bp) protein (426aa)
PA2Cu1_9p (Fragment) n=1 Tax=uncultured organism RepID=K9LKR7_9ZZZZ
Predicted permease {ECO:0000313|EMBL:CDM64069.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_5733314_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

2251..2655
DNA (405bp) protein (135aa)
Putative two-component response regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2V8_9BACT
Putative two-component response regulator {ECO:0000313|EMBL:AAP58606.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
OmpR family two-component response regulator
H3-18-all-fractions_k255_5733314_5
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

2758..3138
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002F0C1F3
PAS domain S-box {ECO:0000313|EMBL:KKW47806.1}; TaxID=1618804 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
winged helix family wo component transcriptional regulator
H3-18-all-fractions_k255_5733314_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3292..4398)
DNA (1107bp) protein (369aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
CspS n=1 Tax=uncultured organism RepID=K9LLE5_9ZZZZ
carbamoyl-phosphate synthase small subunit
H3-18-all-fractions_k255_5733314_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4475..5788)
DNA (1314bp) protein (438aa)
PA2Cu1_7p n=1 Tax=uncultured organism RepID=K9LK75_9ZZZZ
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDM64067.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_5733314_8

Not on your lists

comp(5939..6631)
DNA (693bp) protein (231aa)
SpdI n=1 Tax=uncultured organism RepID=K9LM45_9ZZZZ
SpdI {ECO:0000313|EMBL:AFK83713.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
signal peptidase I type
H3-18-all-fractions_k255_5733314_9

Not on your lists

6962..7339
DNA (378bp) protein (126aa)
IHF n=1 Tax=uncultured organism RepID=K9LKR5_9ZZZZ
IHF {ECO:0000313|EMBL:AFK83712.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
nucleoid DNA-binding protein
H3-18-all-fractions_k255_5733314_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7435..8481
DNA (1047bp) protein (349aa)
Mtp n=1 Tax=uncultured organism RepID=K9LLE1_9ZZZZ
Predicted membrane-associated Zn-dependent protease {ECO:0000313|EMBL:CDM64064.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M50 family protein
H3-18-all-fractions_k255_5733314_11

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comp(8628..9695)
DNA (1068bp) protein (356aa)
PA2Cu1_2p n=1 Tax=uncultured organism RepID=K9LK72_9ZZZZ
PA2Cu1_2p {ECO:0000313|EMBL:AFK83710.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
H3-18-all-fractions_k255_5733314_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9785..10714)
DNA (930bp) protein (310aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQ60_DESK7
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM64048.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator receiver modulated diguanylate cyclase
H3-18-all-fractions_k255_5733314_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11018..11728
DNA (711bp) protein (237aa)
Crp n=1 Tax=uncultured organism RepID=K9LK17_9ZZZZ
cAMP-binding protein {ECO:0000313|EMBL:CDM64047.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Crp/Fnr family transcriptional regulator
H3-18-all-fractions_k255_5733314_14
Marinobacter similis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11893..12102
DNA (210bp) protein (70aa)
DNA gyrase inhibitor YacG n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VTA6_9ALTE
zinc-binding protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1420916 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter similis.;"
H3-18-all-fractions_k255_5733314_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12224..12880
DNA (657bp) protein (219aa)
Alkyl hydroperoxide reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB4_KORVE
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:CDM64046.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
alkyl hydroperoxide reductase
H3-18-all-fractions_k255_5733314_16
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

12958..14184
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F7Z5_SORC5
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
H3-18-all-fractions_k255_5733314_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14257..15693
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5S9D7_9BACT
H3-18-all-fractions_k255_5733314_18
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15700..16299
DNA (600bp) protein (200aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV62_9BURK
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EHR72269.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
RNA polymerase sigma factor
H3-18-all-fractions_k255_5733314_19
unknown

Not on your lists

16500..17114
DNA (615bp) protein (205aa)

This feature has no annotations

H3-18-all-fractions_k255_5733314_20
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17325..20177
DNA (2853bp) protein (951aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV64_9BURK
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
H3-18-all-fractions_k255_5733314_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20479..23139
DNA (2661bp) protein (887aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI15_9BURK
Subtilisin-like serine protease {ECO:0000313|EMBL:CDM65575.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase S8 and S53 subtilisin kexin sedolisin
H3-18-all-fractions_k255_5733314_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23225..25462
DNA (2238bp) protein (746aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003725969
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM66668.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
H3-18-all-fractions_k255_5733314_23
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

25798..27882
DNA (2085bp) protein (695aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV65_9BURK
Subtilase family
Subtilase family {ECO:0000313|EMBL:AHY45721.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
H3-18-all-fractions_k255_5733314_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(28187..29038)
DNA (852bp) protein (284aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPK5_SINAD
dienelactone hydrolase-like enzyme
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:AGA31177.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
H3-18-all-fractions_k255_5733314_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29167..29901
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000381D7A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38988.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
H3-18-all-fractions_k255_5733314_26
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29982..30380
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T931_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT39920.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
hypothetical protein
H3-18-all-fractions_k255_5733314_27
unknown

Not on your lists

comp(30523..30684)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 27 items

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