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H3-18-all-fractions_k255_5901763

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_5901763_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..177
DNA (177bp) protein (59aa)
UvrABC system protein B n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH67_CHLTF
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
excinuclease ABC subunit B
H3-18-all-fractions_k255_5901763_2
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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237..1775
DNA (1539bp) protein (513aa)
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX64_CHLT3
FAD-linked oxidase {ECO:0000313|EMBL:KER09596.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
D-lactate dehydrogenase
H3-18-all-fractions_k255_5901763_3
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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1782..2294
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Mycobacterium indicus pranii MTCC 9506 RepID=J9WBK4_9MYCO
Thiol-disulfide oxidoreductase {ECO:0000313|EMBL:KER09703.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
hypothetical protein
H3-18-all-fractions_k255_5901763_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2323..3501
DNA (1179bp) protein (393aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ6_CHLTF
H3-18-all-fractions_k255_5901763_5
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3514..4122
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZL86_ANACC
Uncharacterized protein {ECO:0000313|EMBL:KJH73038.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
H3-18-all-fractions_k255_5901763_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4142..4936
DNA (795bp) protein (265aa)
putative enoyl-CoA hydratase (EC:4.2.1.17)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Desmospora sp. 8437 RepID=F5SA74_9BACL
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
H3-18-all-fractions_k255_5901763_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5111..5626
DNA (516bp) protein (172aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptide deformylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN4_CHLTF
peptide deformylase
H3-18-all-fractions_k255_5901763_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5801..7402
DNA (1602bp) protein (534aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CDM64928.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDM64928.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase n=3 Tax=Geobacillus RepID=ROCA_GEOKA
H3-18-all-fractions_k255_5901763_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7487..8434
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEM9_9BACT
H3-18-all-fractions_k255_5901763_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8431..9840
DNA (1410bp) protein (470aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ9_9BACT
16S rRNA methyltransferase
H3-18-all-fractions_k255_5901763_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10028..10693
DNA (666bp) protein (222aa)
Lipopolysaccharide kinase family protein n=2 Tax=Clostridium sordellii RepID=T0E0P0_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:CDM64931.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_5901763_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10754..11416
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHA7_CHLTF
H3-18-all-fractions_k255_5901763_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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11508..13142
DNA (1635bp) protein (545aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHA6_CHLTF
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:CDM64933.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
outer membrane assembly lipoprotein YfiO
Displaying 13 items

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