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H3-18-all-fractions_k255_6440061

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_6440061_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3..677
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000362E42A
amidase
Amidase {ECO:0000313|EMBL:ABF40686.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H3-18-all-fractions_k255_6440061_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

833..1864
DNA (1032bp) protein (344aa)
Membrane protease subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEF5_CHLTF
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:CDM64113.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
membrane protease subunit
H3-18-all-fractions_k255_6440061_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

1946..2281
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W211_9FLAO
Tax=RBG_16_Chloroflexi_57_11_curated
H3-18-all-fractions_k255_6440061_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2286..2876)
DNA (591bp) protein (197aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LIZ3_9BACT
2'-5' RNA ligase
H3-18-all-fractions_k255_6440061_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2891..4315)
DNA (1425bp) protein (475aa)
Aldehyde Dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4C0_SPHTD
aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACZ39087.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
H3-18-all-fractions_k255_6440061_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4566..5444
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG70_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65683.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_6440061_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5542..6231
DNA (690bp) protein (230aa)
Uncharacterized membrane-associated protein {ECO:0000313|EMBL:CDM65682.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=12554837 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
H3-18-all-fractions_k255_6440061_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6228..6899
DNA (672bp) protein (224aa)
Uncharacterized membrane-associated protein {ECO:0000313|EMBL:CDM65681.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=12554837 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative membrane-associated protein
H3-18-all-fractions_k255_6440061_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6904..7761)
DNA (858bp) protein (286aa)
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:CDM65680.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM65680.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEP9_9BACT
DNA polymerase III subunit alpha
H3-18-all-fractions_k255_6440061_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7806..8378
DNA (573bp) protein (191aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Orotate phosphoribosyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WL5_SOLUE
orotate phosphoribosyltransferase
H3-18-all-fractions_k255_6440061_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8562..9332
DNA (771bp) protein (257aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZP5_THEOJ
H3-18-all-fractions_k255_6440061_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9481..10272
DNA (792bp) protein (264aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=12556752 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
H3-18-all-fractions_k255_6440061_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10415..11272
DNA (858bp) protein (286aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHE1_CHLTF
H3-18-all-fractions_k255_6440061_14
unknown

Not on your lists

11340..11594
DNA (255bp) protein (85aa)

This feature has no annotations

H3-18-all-fractions_k255_6440061_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11665..12864
DNA (1200bp) protein (400aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIW9_CHLTF
H3-18-all-fractions_k255_6440061_16
unknown

Not on your lists

12878..13126
DNA (249bp) protein (83aa)

This feature has no annotations

H3-18-all-fractions_k255_6440061_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13288..14670
DNA (1383bp) protein (461aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RIP metalloprotease RseP (EC:3.4.24.-)
RIP metalloprotease RseP n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX2_CHLTF
H3-18-all-fractions_k255_6440061_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14786..15892
DNA (1107bp) protein (369aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=4857381 bin=GWC2_Deltaproteobacteria_56_8 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
H3-18-all-fractions_k255_6440061_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16012..17058)
DNA (1047bp) protein (349aa)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:CDM65534.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM65534.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH08_CHLTF
H3-18-all-fractions_k255_6440061_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17255..17893)
DNA (639bp) protein (213aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000256|SAAS:SAAS00031932};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
dTMP kinase n=1 Tax=uncultured prokaryote RepID=H5SEJ9_9ZZZZ
thymidylate kinase
H3-18-all-fractions_k255_6440061_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17942..18241)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000368C2E3
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Hfq protein
H3-18-all-fractions_k255_6440061_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18340..19311)
DNA (972bp) protein (324aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJF0_CHLTF
H3-18-all-fractions_k255_6440061_23
unknown

Not on your lists

comp(19308..19403)
DNA (96bp) protein (32aa)

This feature has no annotations

H3-18-all-fractions_k255_6440061_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(19440..21725)
DNA (2286bp) protein (762aa)
SpoIID/LytB domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI3_CHLTF
SpoIID/LytB domain-containing protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:AEP11384.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
H3-18-all-fractions_k255_6440061_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21896..23041)
DNA (1146bp) protein (382aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIP5_CHLTF
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:CDM65540.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
class C beta-lactamase
H3-18-all-fractions_k255_6440061_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(23142..23441)
DNA (300bp) protein (100aa)
Oxidoreductase, NAD-binding n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F175_ACIC5
Predicted dehydrogenase {ECO:0000313|EMBL:CDM65541.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
oxidoreductase, NAD-binding
Displaying 26 items

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