ggKbase home page

H3-18-all-fractions_k255_6341975_25

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: comp(17138..17644)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 168.0
  • Bit_score: 283
  • Evalue 1.40e-73
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=12555562 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 164.0
  • Bit_score: 223
  • Evalue 1.50e-55
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 162.0
  • Bit_score: 217
  • Evalue 2.40e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGCGACAACCGAGACAGAGAATCCCAGCGCAAGGGCTTGACCTGACCGATCAGGTCATCTCCATCAACCGCGTTACGAAGGTCGTCAAGGGCGGCAAGAACCTCTCGTTCGCCGCACTCGTCATCATCGGCGACGGCGCGGGCCACGTCGGCTTCGGCACGGGCAAGGCGCGCGAAGTCCCCGTCGCCATCAAGAAGGCGATTGAGGCCGCGAAGAAGAACCTGATACGCGTCCCCCTCATCGGCAACACCCTGCCGCACCCGATCATCGGCCACCACGGCGCGGGCCGCGTGCTGATGAAGCCGGCGAGCGAGGGCACGGGCGTCATCGCGGGCGGCGCGGTGCGCGCGGTGATGCAGGCCGCGGGCGTCCACGACGTTCGTACGAAGGTGCTCGGTTCGGGGAACCCGCACAACGTCGTACGCGCGGCCTTCGACGGCCTGCTCAACATGAAAGACCCGTTCGAGGTCGCGCGCCTGCGCGGAAAGCAAGTCGAAGAGCTTTAG
PROTEIN sequence
Length: 169
MRQPRQRIPAQGLDLTDQVISINRVTKVVKGGKNLSFAALVIIGDGAGHVGFGTGKAREVPVAIKKAIEAAKKNLIRVPLIGNTLPHPIIGHHGAGRVLMKPASEGTGVIAGGAVRAVMQAAGVHDVRTKVLGSGNPHNVVRAAFDGLLNMKDPFEVARLRGKQVEEL*