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H3-18-all-fractions_k255_2855500_23

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: 29172..32849

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 1225.0
  • Bit_score: 1637
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 1180.0
  • Bit_score: 1165
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS6_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 1180.0
  • Bit_score: 1165
  • Evalue 0.0

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3678
ATGAGTAGTTCCGTTCAATCAATCCCGATCTTGCAGGGCGTGCTGCGGCGCGTGTTGGAGAGCGAGGAGTTCGTGCGTCTCGCGGCGGCCGTCGGGTCGGGCGCGCGCGTGTTGAGTGTGGCGGGGCTCACGTCAGCGCCCGCGCGTGCGCTGGCGCTCGCGGCATTGCAGCGCGAGACGGGGCGGCGCTTCGCCGTAGTCGTCGCAGCGAACCGCGACATGGAGACGTGGGAGCGCGACCTCTCCTTCTGGTGCGGCGCGCTGCGTGCGGGCGACGCGCGCGAAGAGTGCGAGCCGGTTCTCTTGCTGCCCGCGTCCGAGGGCGACCCTTACGCGGGCGCTTCGCCGCACGCGGAGACGCTTGAACGCCGGGCGCTCGCGCTCTGGCACCTTGCGCACGGGCGCGGGCGGTTCGCGCTCGTCTCCGCGCGCGCTCTCGTACGCCGCACGGTCGCGCCCGAGCAGATAAAGCAGGCGGGCGCGCGTCTGCGTCGAGACGAGGACTATCCGCCCGAGGACTTGGTCGAGCTGCTGCTCGCCTCCGGGTATGTGCGCGAAGACCCCGTGGGCGCGGTCGGCGAGTTCTCTATGCGCGGCGGCATACTCGACGTTTGGTCGCCGGGCGAACAGTCGCCCGTGCGCGTCGAGTTCTTCGGCGACACCGTCGATTCCATCCGACGCTTCGACCCCGAGACGCAGCTCTCGATCGAGCAGTTGCAGAACGTCGAAGTGATACCGATGCGCGAGCTTGCCGTCGGCCGCGACGACTTCCGCCTGTGGGCAGAGTTCGCGCGCGACCGCTGGTCGGACGAGTCGCACGCGCGCGCGCTCAAGGACAGAACCGCCTACGCGTCCGAGGGCGAGACCTTCGCCGGCTGGGAGTGGCTTATACCTTTGGTCGCGCGCACGCCCGCGAGCGGCTTCGACTACCTGCGCGATACCGTGCTCGTCGTGGACGAGCCGACGGGCGTCGAGCAGTACCTCGCGAACAGCTTCGAGAACGTGGCCGCGCGCTACGCCGAGAACGACGCGGCGGGCGAGATCGGACTCAGGCCGGAAGAGCTTTACCTGAGCGTCGAAGAGTTGCGAGAGCGCGTCTCCTCTTCGTCGCGCGTAGAGTTCCGCGCGCTCGGCCGCGCCGCCGCGATAACGGACGAGCGCTTTGCGGGCGAGGCCGAACAGCCAGCCGCGCAGATAGGCCGACGACGCGAAGCGCCCAAGCCTCTCTTCCTATTCCCCGCCGTCGAGCAGGCCCCCGAGATAGAGTGGCGCGCGCTTCCCGCGAAGCGTTATCACGGCCGCATACCCGAACTCGCAACGGACGTTCGACGCGCGCGCGAAACGGGACGCACGCTGACGCTCTTCGCGATGCCTTCGGCGGGCGTAGCCGAGCGCGTCGGCGAGATGCTCTCGGACTACAACGTCTCGTCGCGCGTCGCGTTTGCGGGCGAGGGCGGGCCGTCTACGGAAGGCGTCGAACTATTCGCGGCGGTCGTCACGACGGGCAAGCTCTCGGGCGGTTTTGAATTGCCGGGCTCGGCGCTCGTCGTACACGTCGAGACAGACCTGTTCGACGAGGCGAGCGGCGCGGGGCCGGAGCAGCGCGCGCCCGGCACGGGCTCGGGGACGACCGCGTCGGCGCGGCGGAAGAAGTCGAAGACGGCCGCCTTCCTCTCCGACTTCAGAGATTTAAAAGTCAACGACTACGTCGTACACATAGACCACGGCGTCGCGCGCTTCGGCGGCTTGCAGACACTCGAACTCGGCGGGCGCAAGGGCGAGTTCATGCTGCTCTTCTACGCCGAAGACGCGAAGCTCTACGCGCCCGTCGAGCGGTTGGATTTAGTGCAGCGCTATTCGAGCGCCGAAGGGCACGAGCCGACGCTCGACCGCTTGGGCGGCTTGGGCTGGCAGAAGACGAAGGCGAAGGCCAAGCGCGCGATGCGCGACATGGCCGACGAGCTTCTGAAGTTGTACGCCGAAAGAAAGTTGGTGCAGGGCTACTCCTTCTCGGGCGATAGTCCCTGGCAGCGCGAGTTCGAAGACGCGTTCGAGTACGTGCCGACCGTAGACCAGGAAACGGCCATCGAGGACGTGAAGCGCGACATGGAAGCGTTGACGCCGATGGACAGGCTTCTCTGCGGCGACGTGGGCTACGGCAAGACCGAGGTGGCGATGCGCGCGGCCTTCAAGGCCGTCATGGACTCGAAGCAGACGGCCGTGCTCGCGCCGACGACCGTGCTCGCCTATCAACACTACGAGACCTTCCGCTCGCGCTTCGCCGCCTTCCCCGTCACGATTGAATTGATCTCGCGCTTCCGCTCGGCCAGAGAGCAGAAGGAGATAGTCAAGCGCGTCGAGGCGGGCGACATAGACATCATCATCGGCACGCACAGGCTTCTGTCGAAAGATATCGCCTTCCGCGACCTCGGCCTCGTCGTCGTGGACGAGGAGCAGCGCTTCGGCGTCGCGCACAAGGAGCGGCTCAAGCAGTTGAAGAAGCGCGTGGACGTGCTCACGCTCTCGGCCACGCCCATCCCTCGCACGCTCAACATGTCTCTGATGGGCCTGCGCGACATGTCCGTGATAGAGACTCCGCCGCGCGACCGGCTCGCCATACAGACGCAGGTCGTGCAGTTCTCCGAGTCGGTGATGAAGTCCGCGATAGAGTTGGAGATCGGGCGCGGCGGGCAGGTCTTCTTCATACACAACCGCGTCGAGACGATTGAGACCGTGGCGGCGCTCGTCCAGCGTCTCGTGCCGCGCGCGCGCGTACACGTCGCCCACGGGCAGATGAACGAGAAGGAGATGGAGCAGGCGATGCTCGACTTCGTCGGCTACAAGCACGACGTGCTCGTCGCCACGACGATTATCGAGAACGGGATAGACATCCCACGCGCCAACACAATCATCATAAACCGTGCCGACAACTACGGTCTTTCCCAGCTTTATCAACTCCGCGGGCGTGTGGGGCGCTCGAACCGGCGGGCCTACGCATACCTTCTGATTCCATCCGAGACGGAGTTGACGCCCATCGCGCGCCGCCGCCTCGCGGCGATACGCGAGTTCTCAGACCTCGGCGCGGGCTTCCGCGTCGCGGCCCTAGACCTTGAGCTGCGCGGGGCGGGGAGCCTCTTGGGCGGCGAACAATCGGGCCACATGGACGCGCTCGGCTTCGATCTTTACACGCAGATGTTGGAGCGAACGGTCTCGGAGCTTCGCGGCGAGACCGTCGAGGACGAGACCTCCGTCTCGCTAAACCTCGGCGTTGACGTGGCGATCCCGGAAGACTACATCTCGGACATGGGGCAGCGCCTGCGCACATACAAGCGCGTCTCCTCGGCACGCGACGACGAAGCGCTTGAGCAGATCAGGCGCGAGACGGAAGACCGCTACGGTCGCCTGCCCGAGTCGGTCGAGAGCCTGTTCGCGTACGCGCGTCTCAGGCGCGCCGCCGAAGAGACCGGCGTCACCTCGATTGACCGGACGCCGACGGGGCTCGCCTTCAAGCTGAAGGAGACGGCGCGCGTCTCGCCCGACAAACTGCTCGCGCTCGTCGGCTCAGGGCAGGGCGCATCGTTTAGCCCGAGCGGCGTGCTGAAGGTCGAGCGGGCGGCGGGCGTCGAGATTATCGAGCAGGCGCGCCGCGTGTTGCTGGACGTGCGGGCCGAAGGTTAG
PROTEIN sequence
Length: 1226
MSSSVQSIPILQGVLRRVLESEEFVRLAAAVGSGARVLSVAGLTSAPARALALAALQRETGRRFAVVVAANRDMETWERDLSFWCGALRAGDAREECEPVLLLPASEGDPYAGASPHAETLERRALALWHLAHGRGRFALVSARALVRRTVAPEQIKQAGARLRRDEDYPPEDLVELLLASGYVREDPVGAVGEFSMRGGILDVWSPGEQSPVRVEFFGDTVDSIRRFDPETQLSIEQLQNVEVIPMRELAVGRDDFRLWAEFARDRWSDESHARALKDRTAYASEGETFAGWEWLIPLVARTPASGFDYLRDTVLVVDEPTGVEQYLANSFENVAARYAENDAAGEIGLRPEELYLSVEELRERVSSSSRVEFRALGRAAAITDERFAGEAEQPAAQIGRRREAPKPLFLFPAVEQAPEIEWRALPAKRYHGRIPELATDVRRARETGRTLTLFAMPSAGVAERVGEMLSDYNVSSRVAFAGEGGPSTEGVELFAAVVTTGKLSGGFELPGSALVVHVETDLFDEASGAGPEQRAPGTGSGTTASARRKKSKTAAFLSDFRDLKVNDYVVHIDHGVARFGGLQTLELGGRKGEFMLLFYAEDAKLYAPVERLDLVQRYSSAEGHEPTLDRLGGLGWQKTKAKAKRAMRDMADELLKLYAERKLVQGYSFSGDSPWQREFEDAFEYVPTVDQETAIEDVKRDMEALTPMDRLLCGDVGYGKTEVAMRAAFKAVMDSKQTAVLAPTTVLAYQHYETFRSRFAAFPVTIELISRFRSAREQKEIVKRVEAGDIDIIIGTHRLLSKDIAFRDLGLVVVDEEQRFGVAHKERLKQLKKRVDVLTLSATPIPRTLNMSLMGLRDMSVIETPPRDRLAIQTQVVQFSESVMKSAIELEIGRGGQVFFIHNRVETIETVAALVQRLVPRARVHVAHGQMNEKEMEQAMLDFVGYKHDVLVATTIIENGIDIPRANTIIINRADNYGLSQLYQLRGRVGRSNRRAYAYLLIPSETELTPIARRRLAAIREFSDLGAGFRVAALDLELRGAGSLLGGEQSGHMDALGFDLYTQMLERTVSELRGETVEDETSVSLNLGVDVAIPEDYISDMGQRLRTYKRVSSARDDEALEQIRRETEDRYGRLPESVESLFAYARLRRAAEETGVTSIDRTPTGLAFKLKETARVSPDKLLALVGSGQGASFSPSGVLKVERAAGVEIIEQARRVLLDVRAEG*