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H3-18-all-fractions_k255_2855500

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_2855500_1
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

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3..128
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DUY3_9BACT
methyltransferase type 12
Tax=RBG_16_Planctomycetes_41_13_curated
H3-18-all-fractions_k255_2855500_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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231..1613
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGN9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42426.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
H3-18-all-fractions_k255_2855500_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1664..2647)
DNA (984bp) protein (328aa)
Glycosyl transferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD71_SINAD
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AGA26783.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
H3-18-all-fractions_k255_2855500_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2681..3913)
DNA (1233bp) protein (411aa)
Glycosyl transferase group 1 n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DK37_DESVM
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
H3-18-all-fractions_k255_2855500_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4817..7312
DNA (2496bp) protein (832aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGN9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42426.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
H3-18-all-fractions_k255_2855500_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7584..8615
DNA (1032bp) protein (344aa)
Exopolysaccharide synthesis membrane protein H (Exosortase) n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EAB3_GEOBB
Eight transmembrane protein EpsH, putative exosortase {ECO:0000313|EMBL:CDM65915.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
epsH; exopolysaccharide synthesis multitransmembrane protein H
H3-18-all-fractions_k255_2855500_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8615..9268
DNA (654bp) protein (218aa)
Eight transmembrane protein EpsH n=1 Tax=uncultured bacterium 92 RepID=E3T6B7_9BACT
EpsI family protein {ECO:0000313|EMBL:CDM65914.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
EpsI family protein
H3-18-all-fractions_k255_2855500_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9615..12086
DNA (2472bp) protein (824aa)
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:CDM65913.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein id=4902204 bin=GWC2_Deltaproteobacteria_56_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
H3-18-all-fractions_k255_2855500_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12183..13808
DNA (1626bp) protein (542aa)
Lipopolysaccharide biosynthesis n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028B9_SOLUE
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:CDM65911.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipopolysaccharide biosynthesis protein
H3-18-all-fractions_k255_2855500_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13921..15009
DNA (1089bp) protein (363aa)
Type II secretory pathway, component ExeA (Predicted ATPase) {ECO:0000313|EMBL:CDM65910.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
type II secretory pathway protein ExeA id=12557444 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidoglycan-binding domain-containing protein
H3-18-all-fractions_k255_2855500_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15009..16172
DNA (1164bp) protein (388aa)
Capsular exopolysaccharide family protein n=1 Tax=Enterococcus faecium EnGen0165 RepID=R4FR34_ENTFC
Capsular exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CDM65909.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tyrosine protein kinase
H3-18-all-fractions_k255_2855500_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16179..17567
DNA (1389bp) protein (463aa)
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDM65908.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sugar transferase id=12557446 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sugar transferase
H3-18-all-fractions_k255_2855500_13
unknown

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17567..17899
DNA (333bp) protein (111aa)

This feature has no annotations

H3-18-all-fractions_k255_2855500_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17904..18746
DNA (843bp) protein (281aa)
Polysaccharide export outer membrane protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z369_SPHJU
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:CDM65907.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
gumB; polysaccharide export outer membrane protein
H3-18-all-fractions_k255_2855500_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18748..19857
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6N9_NIAKG
Uncharacterized photosystem II stability/assembly factor-like protein {ECO:0000313|EMBL:CDM65906.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_2855500_16
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

19891..21510
DNA (1620bp) protein (540aa)
Tetratricopeptide repeat domain protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFC9_9BACT
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:BAL54865.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
H3-18-all-fractions_k255_2855500_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(21736..23253)
DNA (1518bp) protein (506aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U2_SOLUE
thiol oxidoreductase-like protein
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:ABJ83484.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-18-all-fractions_k255_2855500_18
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23592..25067
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036ADD86
Uncharacterized protein {ECO:0000313|EMBL:KJK12282.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
H3-18-all-fractions_k255_2855500_19
unknown

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25210..25917
DNA (708bp) protein (236aa)
PREDICTED: zinc finger CCCH domain-containing protein 13 n=1 Tax=Ochotona princeps RepID=UPI00032ADDB4
H3-18-all-fractions_k255_2855500_20
unknown

Not on your lists

comp(26026..26397)
DNA (372bp) protein (124aa)
hypothetical protein
H3-18-all-fractions_k255_2855500_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26460..28379)
DNA (1920bp) protein (640aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lysyl-tRNA synthetase (EC:6.1.1.6)
lysyl-tRNA synthetase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4EC4A
H3-18-all-fractions_k255_2855500_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

28628..29113
DNA (486bp) protein (162aa)
Bifunctional protein HldE n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W4X0_DESIS
D-heptose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:CDM66361.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rfaE bifunctional protein
H3-18-all-fractions_k255_2855500_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

29172..32849
DNA (3678bp) protein (1226aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS6_CHLTF
H3-18-all-fractions_k255_2855500_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

33073..34227
DNA (1155bp) protein (385aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ppic-type ppiase domain protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=14425529 bin=bin1_lowGC species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin1_lowGC organism_group=Unknown_CP
H3-18-all-fractions_k255_2855500_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

34354..34626
DNA (273bp) protein (91aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4-like protein) n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGZ3_CHLTF
ribosome-associated heat shock protein
Ribosome-associated heat shock protein implicated in recycling of 50S subunit {ECO:0000313|EMBL:CDM66358.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_2855500_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

34892..35953
DNA (1062bp) protein (354aa)
Actin-like ATPase involved in cell morphogenesis {ECO:0000313|EMBL:CDM66357.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cell shape determining protein, MreB/Mrl family id=3227267 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rod shape-determining protein MreB
H3-18-all-fractions_k255_2855500_27
unknown

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comp(36039..36272)
DNA (234bp) protein (78aa)

This feature has no annotations

H3-18-all-fractions_k255_2855500_28
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(36299..37393)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DBACD2
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
H3-18-all-fractions_k255_2855500_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(37546..38211)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65712.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_2855500_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(38276..38776)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64568.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Displaying items 1-30 of 57 in total

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