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H3-18-all-fractions_k255_2962587

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_2962587_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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114..944
DNA (831bp) protein (277aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Nucleotidyl transferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGQ7_9BACT
Nucleotidyl transferase {ECO:0000313|EMBL:EEF61108.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
H3-18-all-fractions_k255_2962587_2
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1051..2958
DNA (1908bp) protein (636aa)
peptidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B7AE12
peptidase
Peptidase {ECO:0000313|EMBL:AIZ64116.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
H3-18-all-fractions_k255_2962587_3
unknown

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3142..3606
DNA (465bp) protein (155aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3603..4820
DNA (1218bp) protein (406aa)
Natural resistance-associated macrophage protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDG4_MESCW
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:AHG89148.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2962587_5
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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4822..5178
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J3K5_NOSP7
Uncharacterized protein {ECO:0000313|EMBL:KIF37046.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
H3-18-all-fractions_k255_2962587_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5175..5564
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8E5_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89150.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2962587_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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5816..7324
DNA (1509bp) protein (503aa)
Inner membrane component of tripartite multidrug resistance system
Inner membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:AIE84820.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
drug resistance transporter, EmrB/QacA subfamily id=12556844 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
H3-18-all-fractions_k255_2962587_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7536..9842)
DNA (2307bp) protein (769aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E2CB8
dipeptidyl-peptidase 7
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
H3-18-all-fractions_k255_2962587_9

Not on your lists

comp(10006..10830)
DNA (825bp) protein (275aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKK6_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KKL11672.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
H3-18-all-fractions_k255_2962587_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10827..12047)
DNA (1221bp) protein (407aa)
aminotransferase class I and II
Aminotransferase class I and II {ECO:0000313|EMBL:AHG87861.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aspartate transaminase related protein id=3269360 bin=GWA1_Deltaproteobacteria_52_35 species=Thermoplasma acidophilum genus=Thermoplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
H3-18-all-fractions_k255_2962587_11
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12398..13714)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9PAI9_CYAGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY30145.1}; TaxID=292564 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;"
H3-18-all-fractions_k255_2962587_12
unknown

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comp(13936..14439)
DNA (504bp) protein (168aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_13
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14549..14920)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XUW9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS01180.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
hypothetical protein
H3-18-all-fractions_k255_2962587_14
unknown

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comp(15091..15261)
DNA (171bp) protein (57aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_15
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(15450..16724)
DNA (1275bp) protein (425aa)
PKD domain containing protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM06_9EURY
Serine/threonine protein kinase {ECO:0000313|EMBL:ELZ39678.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288.;"
Beta-barrel assembly machine subunit BamB
H3-18-all-fractions_k255_2962587_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16861..17700)
DNA (840bp) protein (280aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A650_GEMAT
Helix-turn-helix, AraC domain-containing protein
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AHG92531.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2962587_17
unknown

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comp(18478..18714)
DNA (237bp) protein (79aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_18
unknown

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comp(18681..19019)
DNA (339bp) protein (113aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_19
unknown

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19229..19543
DNA (315bp) protein (105aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19621..20010)
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
H3-18-all-fractions_k255_2962587_21
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20134..20601)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003096A4E
Uncharacterized protein {ECO:0000313|EMBL:GAL82910.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-18-all-fractions_k255_2962587_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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20774..21745
DNA (972bp) protein (324aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|SAAS:SAAS00016472}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00277175};; EC=1.8.-.- {ECO:0000256|SAAS:SAAS00016459};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Oxidoreductase molybdopterin binding protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEY9_RHOM4
molybdopterin binding oxidoreductase protein
H3-18-all-fractions_k255_2962587_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21745..22536
DNA (792bp) protein (264aa)
sulfite oxidase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037E88B3
Sulfoxide reductase heme-binding subunit yedZ
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|SAAS:SAAS00016679}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2962587_24
unknown

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comp(22914..23495)
DNA (582bp) protein (194aa)

This feature has no annotations

H3-18-all-fractions_k255_2962587_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23530..24792
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5B5_GEMAT
RNA methylase
RNA methylase {ECO:0000313|EMBL:AHG87609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2962587_26
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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25005..25325
DNA (321bp) protein (107aa)
MOSC domain containing protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GB29_CHLAD
MOSC domain-containing protein
Tax=RBG_16_Chloroflexi_52_11_curated
H3-18-all-fractions_k255_2962587_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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25618..27612
DNA (1995bp) protein (665aa)
diguanylate cyclase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000360C324
GAF sensor hybrid histidine kinase
Tax=RBG_13_Deltaproteobacteria_43_22_curated
Displaying 27 items

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