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H3-18-all-fractions_k255_3448392

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_3448392_1
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(1..693)
DNA (693bp) protein (231aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Ribulose bisphosphate carboxylase large chain n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=RBL_METI4
rbcL; ribulose bisophosphate carboxylase
H3-18-all-fractions_k255_3448392_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(819..1889)
DNA (1071bp) protein (357aa)
cbbF; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
fructose 1,6-bisphosphatase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036A39EC
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
H3-18-all-fractions_k255_3448392_3
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(1889..3061)
DNA (1173bp) protein (391aa)
ketose-bisphosphate aldolase n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003643CF9
fba; fructose/tagatose bisphosphate aldolase
Tax=CG_Anaero_02
H3-18-all-fractions_k255_3448392_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(3279..3962)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQF6_ROSCS
two component LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_63_12_curated
H3-18-all-fractions_k255_3448392_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3973..4665)
DNA (693bp) protein (231aa)
Histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYD5_ROSS1
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ABQ91638.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
H3-18-all-fractions_k255_3448392_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4782..5093)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YEK0_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90236.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_3448392_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5090..5596)
DNA (507bp) protein (169aa)
PEBP family protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B3E0C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09766.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
H3-18-all-fractions_k255_3448392_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5896..7617
DNA (1722bp) protein (574aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A711_GEMAT
ATP-binding region ATPase domain protein
H3-18-all-fractions_k255_3448392_9
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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7649..8203
DNA (555bp) protein (185aa)
GNAT family acetyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BADA9
GCN5-related N-acetyltransferase
Tax=RBG_16_Chloroflexi_52_11_curated
H3-18-all-fractions_k255_3448392_10
unknown

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8350..8676
DNA (327bp) protein (109aa)

This feature has no annotations

H3-18-all-fractions_k255_3448392_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8772..9449
DNA (678bp) protein (226aa)
Carbonic anhydrase n=1 Tax=uncultured gamma proteobacterium RepID=H5SD46_9GAMM id=5224751 bin=16ft_combo_ws3_JS1 species=uncultured gamma proteobacterium genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbonic anhydrase
Tax=RBG_16_RIF_WS3X_71_46_curated
H3-18-all-fractions_k255_3448392_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9531..10475
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KCK6_STRRC
Tetratricopeptide TPR_2 repeat-containing protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AHG88656.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_3448392_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10620..11183)
DNA (564bp) protein (188aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88655.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_3448392_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11448..11939
DNA (492bp) protein (164aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
Putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000313|EMBL:BAH40302.1}; EC=4.2.1.- {ECO:0000313|EMBL:BAH40302.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACS5_GEMAT
H3-18-all-fractions_k255_3448392_15

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11929..12384
DNA (456bp) protein (152aa)
Thioesterase superfamily protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGE9_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48323.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thioesterase superfamily protein
H3-18-all-fractions_k255_3448392_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12993..13853
DNA (861bp) protein (287aa)
Serine/threonine protein kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXG8_RUBXD
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG92503.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_3448392_17
unknown

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13966..14238
DNA (273bp) protein (91aa)

This feature has no annotations

H3-18-all-fractions_k255_3448392_18
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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14467..15054
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W881_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16570.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
H3-18-all-fractions_k255_3448392_19
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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15335..16882
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI000366DAA9
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:CBG70836.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
H3-18-all-fractions_k255_3448392_20
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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17059..17604
DNA (546bp) protein (182aa)
Uncharacterized protein conserved in bacteria n=1 Tax=uncultured gamma proteobacterium HF4000_48E10 RepID=E7C8T9_9GAMM
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
H3-18-all-fractions_k255_3448392_21
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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17696..18160
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Listeria innocua FSL S4-378 RepID=E3YXE0_LISIO
hypothetical protein
Lin0905 protein {ECO:0000313|EMBL:CAC96137.1}; TaxID=272626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria innocua serovar 6a (strain CLIP 11262).;"
H3-18-all-fractions_k255_3448392_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(18261..20618)
DNA (2358bp) protein (786aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88592.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Lytic transglycosylase id=4698165 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 22 items

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