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H3-18-all-fractions_k255_1525147_4

Organism: H3-18-all-fractions_metab_8

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 15 / 38
Location: comp(2325..2918)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 198.0
  • Bit_score: 142
  • Evalue 4.40e-31
2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3U3_PELTS similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 198.0
  • Bit_score: 129
  • Evalue 2.10e-27
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 198.0
  • Bit_score: 142
  • Evalue 8.80e-32

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 594
GTGCGCCTCTTCGTCGCGATTAACCTGCCCGGCGACGTCCGCCGCTCGATCGCCGACGCCACCGCCTCGCTCCGCGCCGCGGCGCCCTCCCTCGCCTGGACCGACGAGGCACGACTGCACCTCACCCTCAAGTTCCTCGGCGAGCAGACGGACGACGCCCGCGAGCCGCTCGCCGCCGCGCTGCGCGCCGTCGCCCCGCGCCACGCGCCGCTCTCCCTGGAGCTGGGCGGACTCGGCGCCTTCCCCACGCGGCGCCGGCCGCGCGTGGTCTGGCTCGGCGTCGCCCCGGACCCGAAGCTGGAGCTCCTCCACCACGAGGTCGAAGTCGCCTGCGCCGATCTGGGGTACGAGATCGAAGGGCGGGCCTTCCGCCCGCACCTCACGCTCGGCCGCGTTCGCGCCGGGCGCGGCGGCGCGCGCGGCCACGACGCGGCGCGCGCCGCCGAGACGGCATCGGCGCTCGACTCGGCCGCCCGCGCGATGCGGCAGCGCTGGACCGCCGCCGTCGACTCGCTCGACCTGATGCGCAGCGAGCTCGCGGCCGGCAGCTCGCGATATTCCGTGCTCGACGCCGTGCCGCTCGGCGCTCGCTAG
PROTEIN sequence
Length: 198
VRLFVAINLPGDVRRSIADATASLRAAAPSLAWTDEARLHLTLKFLGEQTDDAREPLAAALRAVAPRHAPLSLELGGLGAFPTRRRPRVVWLGVAPDPKLELLHHEVEVACADLGYEIEGRAFRPHLTLGRVRAGRGGARGHDAARAAETASALDSAARAMRQRWTAAVDSLDLMRSELAAGSSRYSVLDAVPLGAR*