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H3-18-all-fractions_k255_1525147

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_1525147_1
unknown

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comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

H3-18-all-fractions_k255_1525147_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(106..1479)
DNA (1374bp) protein (458aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:AHG90454.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1525147_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1627..2289)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90453.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1525147_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2325..2918)
DNA (594bp) protein (198aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3U3_PELTS
2'-5' RNA ligase
H3-18-all-fractions_k255_1525147_5
unknown

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comp(2896..3186)
DNA (291bp) protein (97aa)

This feature has no annotations

H3-18-all-fractions_k255_1525147_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3179..4057)
DNA (879bp) protein (293aa)
Conserved hypothetical protein CHP00268
Uncharacterized protein {ECO:0000313|EMBL:AHG90451.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
asparagine synthase; K06864 uncharacterized protein id=12556770 bin=CNBR_ACIDO species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
H3-18-all-fractions_k255_1525147_7
unknown

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comp(4136..4573)
DNA (438bp) protein (146aa)

This feature has no annotations

H3-18-all-fractions_k255_1525147_8
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4735..5304)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK26_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO05188.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
H3-18-all-fractions_k255_1525147_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(5406..6284)
DNA (879bp) protein (293aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI5_RUBXD
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABG05293.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H3-18-all-fractions_k255_1525147_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6366..7949)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J6_GEMAT
Mg chelatase, subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:AHG90450.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1525147_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8714..10693)
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIB5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
H3-18-all-fractions_k255_1525147_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10898..12022)
DNA (1125bp) protein (375aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ3_GEMAT
two-component histidine kinase
H3-18-all-fractions_k255_1525147_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12019..12714)
DNA (696bp) protein (232aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ2_GEMAT
transcriptional regulator domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-18-all-fractions_k255_1525147_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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13268..15019
DNA (1752bp) protein (584aa)
VCBS repeat-containing protein,YVTN family beta-propeller repeat protein n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BFE4_MYCCN
VCBS repeat-containing protein,YVTN family beta-propeller repeat protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
H3-18-all-fractions_k255_1525147_15
unknown

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15241..15384
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 15 items

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