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H3-18-all-fractions_k255_1525147_9

Organism: H3-18-all-fractions_metab_8

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 15 / 38
Location: comp(5406..6284)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 288.0
  • Bit_score: 312
  • Evalue 4.40e-82
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 288.0
  • Bit_score: 312
  • Evalue 1.20e-82
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABG05293.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 288.0
  • Bit_score: 312
  • Evalue 6.20e-82

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGAAAACCGCACAGACGTCTTCACCTCGGCGCGGCCGCTGCTCTTCTCGATCGCCTACCGCATGCTGGGCAGCGTGGCGGACGCCGAAGACGTGGTCCAGGACGCATACCTGCGGTGGCAGGAGGCGCCCGAGGCCGACGTGCGCACGCCGCGCGCCTACCTCGCGACCATCGTCACACGGCTCGCCATCAACCACCTGCGCTCGGCGCGCAACCAGCGCGAAACCTACGTGGGTCCCTGGCTCCCGGAGCCGCTCGTGACCGACCACGCCCCCGATCCCTCGGAGCCCGTCGAGCTGGCCGAGTCGCTCTCGATGGCGTTCATGGTGATGCTCGAGCGCCTGTCGCCGATCGAGCGCGCCGTGCTCCTGCTGCACGACGTGTTCGACTTCGACTACGCCGAGATCGCGCGCATCGTGGACCGGAGCGAGGCGAACTGCCGGCAGCTGCTGTCGCGCGCGAAGAAGCGCCTCGGCAGCGCGGAGGCGCGCTTCGACGCCGACCCGGCGCAGGCCGAGCGGCTGATGCACCGCTTCACCCGGGCGGCGGGCGCCGGGGACGTGGACGGCCTGCTCGCCGTGCTCGCGGAAGACATCACGCTCTGGGCGGACGGCGGCGGCAAGGTGCGAGGCGCCGCCCTCCGGCCGATTCATGGGGCGGACGCGGTCGCGCGCTTCGTCACCGGCGTCATCCAGCGGTTCGTGCCGGTCGAGCGGGTCATGCGCCCGGCGCGGATCAACGGGGAGCCGGGCTTCATCGTGTACGTGAGCGGCCAGCCGCTGGCGGCGATGATCCTCCACATCCGCGACCAGCGCATCCGCGCCATCTACGCGATCGGCAACCCGGACAAGCTCCGTTCCCTCCCCGAGCCGGAGTAG
PROTEIN sequence
Length: 293
MENRTDVFTSARPLLFSIAYRMLGSVADAEDVVQDAYLRWQEAPEADVRTPRAYLATIVTRLAINHLRSARNQRETYVGPWLPEPLVTDHAPDPSEPVELAESLSMAFMVMLERLSPIERAVLLLHDVFDFDYAEIARIVDRSEANCRQLLSRAKKRLGSAEARFDADPAQAERLMHRFTRAAGAGDVDGLLAVLAEDITLWADGGGKVRGAALRPIHGADAVARFVTGVIQRFVPVERVMRPARINGEPGFIVYVSGQPLAAMILHIRDQRIRAIYAIGNPDKLRSLPEPE*