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S1-16-all-fractions_k255_4604649

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_4604649_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..111
DNA (111bp) protein (37aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 3
S1-16-all-fractions_k255_4604649_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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128..1069
DNA (942bp) protein (314aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
malonyl CoA-acyl carrier protein transacylase
S1-16-all-fractions_k255_4604649_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1066..1809
DNA (744bp) protein (248aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W9_GEMAT
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AHG90807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1900..2139
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACP_GEMAT
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2139..3386
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W7_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
S1-16-all-fractions_k255_4604649_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3391..4611
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W6_GEMAT
putative menaquinone biosynthesis protein
Putative menaquinone biosynthesis protein {ECO:0000313|EMBL:AHG90804.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4621..5454
DNA (834bp) protein (278aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W5_GEMAT
protein of unknown function DUF178
S1-16-all-fractions_k255_4604649_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5510..6547
DNA (1038bp) protein (346aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W4_GEMAT
menaquinone biosynthesis protein
S1-16-all-fractions_k255_4604649_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6569..7573
DNA (1005bp) protein (335aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ISPF_GEMAT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
S1-16-all-fractions_k255_4604649_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7581..8189
DNA (609bp) protein (203aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W2_GEMAT
SNARE associated protein
SNARE associated protein {ECO:0000313|EMBL:AHG90800.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8186..9109
DNA (924bp) protein (308aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W1_GEMAT
Tyrosine recombinase xerC
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9290..9865
DNA (576bp) protein (192aa)
Anthranilate synthase component II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W0_GEMAT
glutamine amidotransferase of anthranilate synthase
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:AHG90798.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9862..11412
DNA (1551bp) protein (517aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90797.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Hypothetical membrane protein id=1939344 bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
S1-16-all-fractions_k255_4604649_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11511..12314
DNA (804bp) protein (268aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=KDSB_GEMAT
3-deoxy-manno-octulosonate cytidylyltransferase
S1-16-all-fractions_k255_4604649_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12325..13971
DNA (1647bp) protein (549aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
CTP synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V6_GEMAT
S1-16-all-fractions_k255_4604649_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13974..14819
DNA (846bp) protein (282aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V5_GEMAT
S1-16-all-fractions_k255_4604649_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14816..15397
DNA (582bp) protein (194aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:BAH38664.1}; EC=3.1.3.45 {ECO:0000313|EMBL:BAH38664.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V4_GEMAT
S1-16-all-fractions_k255_4604649_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15394..16389
DNA (996bp) protein (332aa)
Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V3_GEMAT
KpsF/GutQ family protein
KpsF/GutQ family protein {ECO:0000313|EMBL:AHG90791.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16404..17042
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38662.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_4604649_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17039..18559
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90789.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18556..19767
DNA (1212bp) protein (404aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG90788.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19764..21233
DNA (1470bp) protein (490aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
RNA polymerase sigma-54 factor, RpoN
RNA polymerase sigma-54 factor, RpoN {ECO:0000313|EMBL:AHG90787.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21230..22270
DNA (1041bp) protein (347aa)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHG90786.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22387..23256
DNA (870bp) protein (290aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD {ECO:0000313|EMBL:AHG90784.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4604649_25
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23309..24355)
DNA (1047bp) protein (349aa)
Nodulation protein L n=2 Tax=Bordetella avium RepID=Q8VP05_BORAV
lipid A biosynthesis protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
S1-16-all-fractions_k255_4604649_26
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

24520..25971
DNA (1452bp) protein (484aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1K1_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ92754.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
S1-16-all-fractions_k255_4604649_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25980..26957
DNA (978bp) protein (326aa)
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U7_GEMAT
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AHG90785.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 27 items

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