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S1-16-all-fractions_k255_4957498

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_4957498_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

S1-16-all-fractions_k255_4957498_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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269..1465
DNA (1197bp) protein (399aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5F2_CONWI
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADB50619.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S1-16-all-fractions_k255_4957498_3
unknown

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comp(1519..1968)
DNA (450bp) protein (150aa)

This feature has no annotations

S1-16-all-fractions_k255_4957498_4
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2478..5051
DNA (2574bp) protein (858aa)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3)
Glucan 1,4-alpha-glucosidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPK2_NITHX
Tax=RBG_13_Deltaproteobacteria_65_10_curated
S1-16-all-fractions_k255_4957498_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5449..7344
DNA (1896bp) protein (632aa)
Amino acid permease-associated region n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V007_ROSS1
amino acid permease-associated protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S1-16-all-fractions_k255_4957498_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7420..8973
DNA (1554bp) protein (518aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
PDZ/DHR/GLGF domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S1-16-all-fractions_k255_4957498_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8993..9667
DNA (675bp) protein (225aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACF3_GEMAT
OmpR family two-component response regulator
OmpR family two-component response regulator {ECO:0000313|EMBL:BAH40180.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_4957498_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9660..11069
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEF8_GEMAT
two-component histidine kinase
S1-16-all-fractions_k255_4957498_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11217..11750
DNA (534bp) protein (178aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89941.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4957498_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11859..12539
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP4_GEMAT
Protein of unknown function DUF2225
Uncharacterized protein {ECO:0000313|EMBL:AHG88598.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4957498_11
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12584..13132
DNA (549bp) protein (183aa)
Peroxiredoxin n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1D4_DESTA
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFM23375.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
S1-16-all-fractions_k255_4957498_12
unknown

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comp(13331..13735)
DNA (405bp) protein (135aa)

This feature has no annotations

S1-16-all-fractions_k255_4957498_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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14002..14661
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GSS1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56950.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
lipoprotein
S1-16-all-fractions_k255_4957498_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14665..15261
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGE9_SINAD
Uncharacterized protein {ECO:0000313|EMBL:CDM66411.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
S1-16-all-fractions_k255_4957498_15
unknown

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comp(15343..15741)
DNA (399bp) protein (133aa)

This feature has no annotations

S1-16-all-fractions_k255_4957498_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15772..16764)
DNA (993bp) protein (331aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H576_9DELT
Helix-turn-helix, AraC domain-containing protein
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AHG93232.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_4957498_17
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

17284..17568
DNA (285bp) protein (95aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ58540.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AFZ58540.1};; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00037C0583
Displaying 17 items

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