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S1-16-all-fractions_k255_2191833_12

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: 7442..7984

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 175.0
  • Bit_score: 164
  • Evalue 7.00e-38
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 180.0
  • Bit_score: 222
  • Evalue 6.10e-56
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 180.0
  • Bit_score: 228
  • Evalue 4.20e-57

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 543
TTGGACGAACGCCAGCTGGTCAGCAGCGTCCTCGCGGGGGACATGCTCGCGGCACGCGCGCTGTACGACGCGCACGTCGCGCGCGTGCACCGGGTCGTCGGACGCTTCACGGGGGACCCGGACCTCGCGCAGGACTTCGCGCAGGAGGCGTTCATCCGCGCCTTCCGGCGGCTGCCCGAGTTCCGCTTCGAGTCCTCGCTCGGCACCTGGCTCTCGACCATCGCGGCGAGCGCCGCGCTGGACGGGCTGCGGAAGGTGAAGCGCTTCCGGAGCCGGGAGGCGGAGCTGGACGAGGCGGGAGAGGTGGGGACGGCGCGCCGCGAGGCGGAGCCGGACCTGAAGGTGAGGCTCGCGCGGGCCATCAACGGATTGCCGGAGATCTACCGGTCGGTCTTCATCATGTACGACGTCGAGGGGCACACGCACGAGGAGGTCGGCGCCGCGCTCGGGATCCCGAGCGGCACCTCCAAGGCGCGGCTCTCGGTGGCCAGGGCCAAGCTGCGCGAGGCGCTGGCCGACTTCGCGGGAGAATGGATCGCATGA
PROTEIN sequence
Length: 181
LDERQLVSSVLAGDMLAARALYDAHVARVHRVVGRFTGDPDLAQDFAQEAFIRAFRRLPEFRFESSLGTWLSTIAASAALDGLRKVKRFRSREAELDEAGEVGTARREAEPDLKVRLARAINGLPEIYRSVFIMYDVEGHTHEEVGAALGIPSGTSKARLSVARAKLREALADFAGEWIA*