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S1-16-all-fractions_k255_2191833

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_2191833_1
unknown

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comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

S1-16-all-fractions_k255_2191833_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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235..711
DNA (477bp) protein (159aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89711.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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711..1598
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC68_9ZZZZ
Protein of unknown function DUF2911
Uncharacterized protein {ECO:0000313|EMBL:AHG89710.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_4
unknown

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comp(1641..1946)
DNA (306bp) protein (102aa)

This feature has no annotations

S1-16-all-fractions_k255_2191833_5
Lysinibacillus odysseyi, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2053..2589
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003677172
Acetyltransferase {ECO:0000313|EMBL:KGR84435.1}; TaxID=1220589 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus odysseyi 34hs-1 = NBRC 100172.;"
acetyltransferase
S1-16-all-fractions_k255_2191833_6
unknown

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comp(2542..2637)
DNA (96bp) protein (32aa)

This feature has no annotations

S1-16-all-fractions_k255_2191833_7
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2723..3346)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002FA772D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIT68531.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
S1-16-all-fractions_k255_2191833_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3560..4108
DNA (549bp) protein (183aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QEJ1_9FIRM
S1-16-all-fractions_k255_2191833_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4129..4839
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
UPI0003CF12EA related cluster n=1 Tax=unknown RepID=UPI0003CF12EA
pseudouridine synthase Rsu
S1-16-all-fractions_k255_2191833_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5073..5909
DNA (837bp) protein (279aa)
Uncharacterized protein-like protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8U9_GEOUR
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AHG91991.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6084..7292)
DNA (1209bp) protein (403aa)
syn:sll0006 aspC; aspartate aminotransferase (EC:2.6.1.1); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] id=19472 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
aminotransferase class I and II
Aminotransferase class I and II {ECO:0000313|EMBL:AHG90402.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7442..7984
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S1-16-all-fractions_k255_2191833_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7981..8697
DNA (717bp) protein (239aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S1-16-all-fractions_k255_2191833_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8788..10665
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39859.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_2191833_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10755..11516
DNA (762bp) protein (254aa)
UPI0003D7A767 related cluster n=3 Tax=Aminicenantes RepID=UPI0003D7A767
PBS lyase HEAT domain protein repeat-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S1-16-all-fractions_k255_2191833_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11550..12617)
DNA (1068bp) protein (356aa)
membrane protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000363F397
putative protein family UPF0324
Uncharacterized protein {ECO:0000313|EMBL:AHG88494.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_17
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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12644..13750
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037663A5
Amidohydrolase {ECO:0000313|EMBL:KIF34900.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
amidohydrolase 2
S1-16-all-fractions_k255_2191833_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13789..15609
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4Q0A7_9CAUL
glycoside hydrolase family 43
Glycoside hydrolase family 43 {ECO:0000313|EMBL:AHG93874.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15713..17971)
DNA (2259bp) protein (753aa)
Beta-glucosidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEK4_RHOMR
glycoside hydrolase family 3 domain protein
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:AHG89211.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_2191833_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18097..19443)
DNA (1347bp) protein (449aa)
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24457720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Displaying 20 items

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