ggKbase home page

S1-16-all-fractions_k255_1042963

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_1042963_1
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106..1029)
DNA (924bp) protein (308aa)
Transposase IS4 family protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IYH0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:AIU93800.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
transposase IS4 family protein
S1-16-all-fractions_k255_1042963_2
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1900..2229
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00035ED505
Acetyltransferase {ECO:0000313|EMBL:KHD97112.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
thiamine pyrophosphate-binding protein
S1-16-all-fractions_k255_1042963_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2276..2545)
DNA (270bp) protein (90aa)
Resolvase helix-turn-helix domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U374_9CHLR
Resolvase helix-turn-helix domain protein {ECO:0000313|EMBL:EFH81078.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transposase and inactivated derivatives-like protein
S1-16-all-fractions_k255_1042963_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2858..3247)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1W9_9SPHN
DNA, contig: SP623 {ECO:0000313|EMBL:GAN13691.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
S1-16-all-fractions_k255_1042963_5
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3791..5653)
DNA (1863bp) protein (621aa)
Histidine kinase n=1 Tax=Frankia sp. QA3 RepID=I9KL51_9ACTO
Histidine kinase {ECO:0000313|EMBL:EIV94970.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
integral membrane sensor signal transduction histidine kinase
S1-16-all-fractions_k255_1042963_6
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5771..6457
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037DF711
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:KJE19825.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
LuxR family two component transcriptional regulator
S1-16-all-fractions_k255_1042963_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6479..6904
DNA (426bp) protein (142aa)
Transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TI91_9CHLR
Transposase {ECO:0000313|EMBL:EFH89148.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transposase
S1-16-all-fractions_k255_1042963_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6952..7494
DNA (543bp) protein (181aa)
Transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TI91_9CHLR
Transposase {ECO:0000313|EMBL:EFH89148.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
tnpF1; transposase, fragment
S1-16-all-fractions_k255_1042963_9
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7677..8132
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Gordonia polyisoprenivorans RepID=UPI00036E85FC
Immunity protein {ECO:0000313|EMBL:KGM14418.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
S1-16-all-fractions_k255_1042963_10
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8382..8603)
DNA (222bp) protein (74aa)
IS630 family transposase
IS630 family transposase {ECO:0000313|EMBL:AJC62101.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
S1-16-all-fractions_k255_1042963_11
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8689..9201)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00037EBE7F
transposase, IS630 family
Transposase, IS630 family {ECO:0000313|EMBL:AJC62100.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
S1-16-all-fractions_k255_1042963_12
unknown

Not on your lists

comp(9268..9438)
DNA (171bp) protein (57aa)

This feature has no annotations

S1-16-all-fractions_k255_1042963_13
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9696..10898
DNA (1203bp) protein (401aa)
Transposase, IS4 family n=3 Tax=Frankia sp. (strain CcI3) RepID=Q2JDZ3_FRASC
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:KDA41184.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
S1-16-all-fractions_k255_1042963_14
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11044..11934)
DNA (891bp) protein (297aa)
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6G5_PSEUX
Integrase {ECO:0000313|EMBL:KGH45226.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
integrase catalytic subunit
S1-16-all-fractions_k255_1042963_15
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11931..12221)
DNA (291bp) protein (97aa)
Transposase IS3/IS911 family protein n=1 Tax=Dietzia cinnamea P4 RepID=E6JAM1_9ACTO
Transposase {ECO:0000313|EMBL:KGH45225.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
transposase IS3/IS911 family protein
S1-16-all-fractions_k255_1042963_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13170..15554
DNA (2385bp) protein (795aa)
Helicase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJU0_BLASD
Helicase
Helicase {ECO:0000313|EMBL:CCG03593.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
S1-16-all-fractions_k255_1042963_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16047..16322
DNA (276bp) protein (92aa)
Prevent-host-death family protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEG8_GEOOG
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ADB74640.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S1-16-all-fractions_k255_1042963_18
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16319..16594
DNA (276bp) protein (92aa)
Plasmid stabilization system n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEG7_GEOOG
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ADB74639.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S1-16-all-fractions_k255_1042963_19
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17027..17437
DNA (411bp) protein (137aa)
Putative Tyrosine recombinase xerC n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0C4_MODMB
tyrosine recombinase XerC
Putative Tyrosine recombinase xerC {ECO:0000313|EMBL:CCH89087.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S1-16-all-fractions_k255_1042963_20
unknown

Not on your lists

17461..17550
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 20 items

View Taxonomy