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S1-16-all-fractions_k255_1110687

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_1110687_1
unknown

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3..80
DNA (78bp) protein (26aa)

This feature has no annotations

S1-16-all-fractions_k255_1110687_2
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(303..956)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WL32_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB94516.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
NAD-dependent epimerase/dehydratase
S1-16-all-fractions_k255_1110687_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1101..1664
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Nocardioides sp. CF8 RepID=R7XXW5_9ACTO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
elongation factor P
S1-16-all-fractions_k255_1110687_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1674..2084
DNA (411bp) protein (137aa)
N utilization substance protein B homolog n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUSB_NOCSJ
transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1110687_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2162..2971
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWV0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23773.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_1110687_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2999..3694)
DNA (696bp) protein (232aa)
Regulatory protein, TetR n=1 Tax=Nocardioides sp. CF8 RepID=R7XWW4_9ACTO
Regulatory protein, TetR {ECO:0000313|EMBL:EON23771.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
regulatory protein TetR
S1-16-all-fractions_k255_1110687_7
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3748..4593
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H717_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EDY62628.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
2SCK36.08; hypothetical protein
S1-16-all-fractions_k255_1110687_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4594..6123)
DNA (1530bp) protein (510aa)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXS3_9ACTO
S1-16-all-fractions_k255_1110687_9
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6175..6798
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037D3B71
Uncharacterized protein {ECO:0000313|EMBL:CCH77186.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
FMN-binding negative transcriptional regulator
S1-16-all-fractions_k255_1110687_10
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6795..7412
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI000363AB2C
Uncharacterized protein {ECO:0000313|EMBL:EWT01235.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
S1-16-all-fractions_k255_1110687_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7450..8211)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H0T8_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46185.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S1-16-all-fractions_k255_1110687_12
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8208..8960)
DNA (753bp) protein (251aa)
ABC transporter n=1 Tax=Agromyces subbeticus RepID=UPI0003B543D0
ABC transporter {ECO:0000313|EMBL:KHL15226.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
ABC transporter-like protein
S1-16-all-fractions_k255_1110687_13
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8957..9517)
DNA (561bp) protein (187aa)
TetR family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B3ABBA
TetR family transcriptional regulator
Tax=BJP_IG2157_Actinomycetales_63_19
S1-16-all-fractions_k255_1110687_14
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9851..10717)
DNA (867bp) protein (289aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036B3BC7
tryptophan 2,3-dioxygenase
S1-16-all-fractions_k255_1110687_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10758..11693
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKK8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82343.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 15 items

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