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S1-16-all-fractions_k255_1473534

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_1473534_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..874
DNA (873bp) protein (291aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABL82356.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABL82356.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKM1_NOCSJ
S1-16-all-fractions_k255_1473534_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1049..1582
DNA (534bp) protein (178aa)
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. CF8 RepID=R7XXD3_9ACTO
Sigma-70, region 4 type 2 {ECO:0000313|EMBL:EON23660.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
RNA polymerase sigma-70 factor
S1-16-all-fractions_k255_1473534_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1579..2655
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWH7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23661.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-16-all-fractions_k255_1473534_4
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2701..4221)
DNA (1521bp) protein (507aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKM4_NOCSJ
Amino acid permease {ECO:0000313|EMBL:KGN34323.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
amino acid permease-associated protein
S1-16-all-fractions_k255_1473534_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4271..6175)
DNA (1905bp) protein (635aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWG9_9ACTO
S1-16-all-fractions_k255_1473534_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6192..7106)
DNA (915bp) protein (305aa)
Strictosidine synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWE5_9ACTO
Strictosidine synthase {ECO:0000313|EMBL:EON23664.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
strictosidine synthase
S1-16-all-fractions_k255_1473534_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7103..8005)
DNA (903bp) protein (301aa)
NUDIX hydrolase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXE1_9ACTO
NUDIX hydrolase {ECO:0000313|EMBL:EON23665.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
NUDIX hydrolase
S1-16-all-fractions_k255_1473534_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8026..8358)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWI3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23666.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_1473534_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8482..9027)
DNA (546bp) protein (182aa)
N-acetyltransferase GCN5 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXT5_9ACTO
hypothetical protein
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIY19640.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S1-16-all-fractions_k255_1473534_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9082..9486)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003789FFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY19086.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S1-16-all-fractions_k255_1473534_11
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9524..10510
DNA (987bp) protein (329aa)
ArsR family transcriptional regulator id=24416834 bin=RBG_19FT_COMBO_GAL15_69_19 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ArsR family transcriptional regulator
Tax=RBG_16_Actinobacteria_70_17_curated
S1-16-all-fractions_k255_1473534_12
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10563..11564
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z7N5_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KEY98380.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
hypothetical protein
S1-16-all-fractions_k255_1473534_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11575..11877)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKN8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82373.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1473534_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11908..12597)
DNA (690bp) protein (230aa)
Membrane protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWH4_9ACTO
Membrane protein {ECO:0000313|EMBL:EON23668.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_1473534_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12594..13088)
DNA (495bp) protein (165aa)
Sigma-70 region 4 domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKP0_NOCSJ
sigma-70 region 4 domain-containing protein
Sigma-70 region 4 domain protein {ECO:0000313|EMBL:ABL82375.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1473534_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13075..14421)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKP1_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82376.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1473534_17
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14507..15103)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI85_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75430.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S1-16-all-fractions_k255_1473534_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15100..16716)
DNA (1617bp) protein (539aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Aconitase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKP3_NOCSJ
Displaying 18 items

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