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S1-16-all-fractions_k255_2648605

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_2648605_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..1311
-----------------
DNA (1311bp)
protein (437aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2C6_9ACTO
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
S1-16-all-fractions_k255_2648605_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1354..2553)
-----------------
DNA (1200bp)
protein (400aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1K3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25413.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-16-all-fractions_k255_2648605_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2679..3314
-----------------
DNA (636bp)
protein (212aa)
Beta-lactamase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1F2_9ACTO
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EON25414.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
beta-lactamase domain-containing protein
S1-16-all-fractions_k255_2648605_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3324..4565)
-----------------
DNA (1242bp)
protein (414aa)
Isochorismate synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SE23_NOCSJ
isochorismate synthase
Isochorismate synthase {ECO:0000313|EMBL:ABL80058.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_2648605_5
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4755..5867
-----------------
DNA (1113bp)
protein (371aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MEA3_9ACTO
AMP-dependent synthetase {ECO:0000313|EMBL:KJR11379.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
AMP-binding protein
S1-16-all-fractions_k255_2648605_6
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6018..7268
-----------------
DNA (1251bp)
protein (417aa)
AMP-dependent synthetase {ECO:0000313|EMBL:KIF05821.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
AMP-dependent synthetase and ligase
S1-16-all-fractions_k255_2648605_7
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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7370..7735
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I8QZT2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV96074.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
S1-16-all-fractions_k255_2648605_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7803..8819)
-----------------
DNA (1017bp)
protein (339aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1H8_9ACTO
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:EON25416.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
peptidoglycan-binding domain protein
S1-16-all-fractions_k255_2648605_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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8966..9610
-----------------
DNA (645bp)
protein (215aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Demethylmenaquinone methyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=UBIE_NOCSJ
S1-16-all-fractions_k255_2648605_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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9807..10166
-----------------
DNA (360bp)
protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1K8_9ACTO
nuoA1; putative NADH-quinone oxidoreductase subunit A
S1-16-all-fractions_k255_2648605_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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10176..10730
-----------------
DNA (555bp)
protein (185aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUOB_NOCSJ
S1-16-all-fractions_k255_2648605_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10727..11548
-----------------
DNA (822bp)
protein (274aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH-quinone oxidoreductase subunit C n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUOC_NOCSJ
S1-16-all-fractions_k255_2648605_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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11548..12888
-----------------
DNA (1341bp)
protein (447aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1I3_9ACTO
S1-16-all-fractions_k255_2648605_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12885..13553
-----------------
DNA (669bp)
protein (223aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1C7_9ACTO
NADH dehydrogenase subunit E {ECO:0000313|EMBL:EON25422.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-16-all-fractions_k255_2648605_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13546..14304
-----------------
DNA (759bp)
protein (253aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase subunit F {ECO:0000313|EMBL:ABL80067.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABL80067.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH dehydrogenase subunit F n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SE32_NOCSJ
Displaying 15 items

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