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S1-16-all-fractions_k255_3287916

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_3287916_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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173..520
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWD8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23290.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_3287916_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

578..1726
DNA (1149bp) protein (383aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RLMN_NOCSJ
ribosomal RNA large subunit methyltransferase N
S1-16-all-fractions_k255_3287916_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1802..3013
DNA (1212bp) protein (404aa)
Glycosyl transferase, group 1 n=1 Tax=Nocardioides sp. CF8 RepID=R7XVF1_9ACTO
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EON23288.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
group 1 glycosyl transferase
S1-16-all-fractions_k255_3287916_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2991..4091)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVC8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23284.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Rossmann fold nucleotide-binding protein
S1-16-all-fractions_k255_3287916_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4148..5029)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVE7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23283.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
serine/threonine protein kinase
S1-16-all-fractions_k255_3287916_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5211..6677
DNA (1467bp) protein (489aa)
Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVB7_9ACTO
Peptidase M1, membrane alanine aminopeptidase {ECO:0000313|EMBL:EON23282.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
peptidase M1, membrane alanine aminopeptidase
S1-16-all-fractions_k255_3287916_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6680..7291
DNA (612bp) protein (204aa)
Propionate--CoA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVF7_9ACTO
Propionate--CoA ligase {ECO:0000313|EMBL:EON23281.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
acyl-CoA synthetase/AMP-acid ligase
S1-16-all-fractions_k255_3287916_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7304..8398
DNA (1095bp) protein (365aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWD2_9ACTO
1-deoxy-D-xylulose 5-phosphate reductoisomerase
S1-16-all-fractions_k255_3287916_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8483..9829
DNA (1347bp) protein (449aa)
Peptidase M50 n=1 Tax=Nocardioides sp. CF8 RepID=R7XVC5_9ACTO
Peptidase M50 {ECO:0000313|EMBL:EON23279.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
peptidase M50
S1-16-all-fractions_k255_3287916_10
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9910..11040
DNA (1131bp) protein (377aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLL9_NOCSJ
S1-16-all-fractions_k255_3287916_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11084..11935
DNA (852bp) protein (284aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVB3_9ACTO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EON23277.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
N-acetyltransferase GCN5
S1-16-all-fractions_k255_3287916_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12011..12622
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003180172
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KDA04765.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
sigma-70 region 2 domain-containing protein
S1-16-all-fractions_k255_3287916_13
unknown

Not on your lists

12619..13074
DNA (456bp) protein (152aa)

This feature has no annotations

S1-16-all-fractions_k255_3287916_14
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13079..14359)
DNA (1281bp) protein (427aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PTU8_KRIFD
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADB33231.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-16-all-fractions_k255_3287916_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14441..17029
DNA (2589bp) protein (863aa)
Tetratricopeptide TPR_4 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PTU7_KRIFD
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:ADB33230.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
hypothetical protein
S1-16-all-fractions_k255_3287916_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17035..18015)
DNA (981bp) protein (327aa)
Serine/arginine repetitive matrix protein 2 n=1 Tax=Nocardioides sp. CF8 RepID=R7XVF2_9ACTO
Serine/arginine repetitive matrix protein 2 {ECO:0000313|EMBL:EON23276.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-16-all-fractions_k255_3287916_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18147..18836
DNA (690bp) protein (230aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWC7_9ACTO
Displaying 17 items

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