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S1-16-all-fractions_k255_3557315

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_3557315_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..424
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XZL8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24797.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_3557315_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(426..1673)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKM5_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82360.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_3557315_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1745..2926
DNA (1182bp) protein (394aa)
Aminotransferase, class V n=1 Tax=Nocardioides sp. CF8 RepID=R7XZV8_9ACTO
Aminotransferase, class V {ECO:0000313|EMBL:EON24798.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
class V aminotransferase
S1-16-all-fractions_k255_3557315_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2926..4032
DNA (1107bp) protein (369aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=MNMA_NOCSJ
S1-16-all-fractions_k255_3557315_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4029..5018
DNA (990bp) protein (330aa)
Methionine synthase, vitamin-B12 independent n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0P4_9ACTO
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EON24800.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
methionine synthase, vitamin-B12 independent
S1-16-all-fractions_k255_3557315_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5072..5704)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XZR7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24801.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_3557315_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5812..7482)
DNA (1671bp) protein (557aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Nocardioides sp. CF8 RepID=R7XZM2_9ACTO
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:EON24802.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
EmrB/QacA family drug resistance transporter
S1-16-all-fractions_k255_3557315_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7525..8142)
DNA (618bp) protein (206aa)
TetR family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XZW4_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:EON24803.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
TetR family transcriptional regulator
S1-16-all-fractions_k255_3557315_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8270..10453
DNA (2184bp) protein (728aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000313|EMBL:AIY20046.1}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000313|EMBL:AIY20046.1};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
DNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZQ2_9ACTO
NAD-dependent DNA ligase LigA
S1-16-all-fractions_k255_3557315_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10522..11784
DNA (1263bp) protein (421aa)
RTX toxin n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0P8_9ACTO
RTX toxin {ECO:0000313|EMBL:EON24805.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hemolysin-type calcium-binding protein
S1-16-all-fractions_k255_3557315_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

11842..14076
DNA (2235bp) protein (745aa)
Two component signal transduction histidine kinase id=14629955 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
Two component signal transduction histidine kinase
Tax=CSP1_4_Chloroflexi
S1-16-all-fractions_k255_3557315_12
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14094..14738
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCW3_9CHLR
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIL39607.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
LuxR family two component transcriptional regulator
S1-16-all-fractions_k255_3557315_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14768..15679)
DNA (912bp) protein (304aa)
Cell envelope-related transcriptional n=1 Tax=Nocardioides sp. CF8 RepID=R7XYU1_9ACTO
Cell envelope-related transcriptional {ECO:0000313|EMBL:EON24537.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
transcriptional regulator
S1-16-all-fractions_k255_3557315_14
unknown

Not on your lists

comp(15676..16296)
DNA (621bp) protein (207aa)

This feature has no annotations

S1-16-all-fractions_k255_3557315_15
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16320..17612)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000371C33B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW93490.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
S1-16-all-fractions_k255_3557315_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18048..18347
DNA (300bp) protein (100aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMA2_NOCSJ
S1-16-all-fractions_k255_3557315_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18347..19924
DNA (1578bp) protein (526aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Nocardioides sp. CF8 RepID=R7XV04_9ACTO
S1-16-all-fractions_k255_3557315_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19921..21429
DNA (1509bp) protein (503aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Nocardioides sp. CF8 RepID=R7XV51_9ACTO
S1-16-all-fractions_k255_3557315_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21586..22857
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XW19_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23185.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_3557315_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23189..24169
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM97_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82932.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_3557315_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24191..25300
DNA (1110bp) protein (370aa)
Cobalt transport protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XV52_9ACTO
Cobalt transport protein {ECO:0000313|EMBL:EON23183.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
cobalt transport protein
S1-16-all-fractions_k255_3557315_22
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25297..26892
DNA (1596bp) protein (532aa)
ABC transporter-like protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XV00_9ACTO
ABC transporter-like protein {ECO:0000313|EMBL:EON23182.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ABC transporter-like protein
S1-16-all-fractions_k255_3557315_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26889..27713
DNA (825bp) protein (275aa)
Integral membrane protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XV49_9ACTO
Integral membrane protein {ECO:0000313|EMBL:EON23181.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
integral membrane protein
S1-16-all-fractions_k255_3557315_24
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27717..28871)
DNA (1155bp) protein (385aa)
Glucose sorbosone dehydrogenase n=1 Tax=Nocardioides sp. CF8 RepID=R7XW13_9ACTO
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EON23180.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
glucose sorbosone dehydrogenase
S1-16-all-fractions_k255_3557315_25
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28882..29781)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XV48_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23178.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_3557315_26
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29791..30372)
DNA (582bp) protein (194aa)
PadR family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XUZ6_9ACTO
PadR family transcriptional regulator {ECO:0000313|EMBL:EON23177.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
PadR family transcriptional regulator
S1-16-all-fractions_k255_3557315_27
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30449..31540
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XV44_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23176.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_3557315_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31557..32030
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKJ3_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78755.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
S1-16-all-fractions_k255_3557315_29
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32344..32982
DNA (639bp) protein (213aa)
XRE family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XWI0_9ACTO
XRE family transcriptional regulator {ECO:0000313|EMBL:EON23673.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
XRE family transcriptional regulator
S1-16-all-fractions_k255_3557315_30
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33061..34752
DNA (1692bp) protein (564aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Dihydroxy-acid dehydratase n=1 Tax=Nocardioides sp. CF8 RepID=R7XV11_9ACTO
ilvD; dihydroxy-acid dehydratase
Displaying items 1-30 of 32 in total

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