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S1-16-all-fractions_k255_5607577

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_5607577_1
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1465)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E1H8_9MICO
EmrB/QacA family drug resistance transporter
Uncharacterized protein {ECO:0000313|EMBL:CCH70823.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
S1-16-all-fractions_k255_5607577_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1588..3318)
DNA (1731bp) protein (577aa)
Na+/solute symporter n=1 Tax=Nocardioides sp. CF8 RepID=R7XTM6_9ACTO
Na+/solute symporter {ECO:0000313|EMBL:EON22668.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Na+/solute symporter
S1-16-all-fractions_k255_5607577_3
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3315..3596)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGV9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAQ00069.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
S1-16-all-fractions_k255_5607577_4
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3685..4110)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UX09_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD42421.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
S1-16-all-fractions_k255_5607577_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4245..5300)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTP5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22666.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_5607577_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5497..7209)
DNA (1713bp) protein (571aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Lysine--tRNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XUH0_9ACTO
lysyl-tRNA synthetase
S1-16-all-fractions_k255_5607577_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7387..8376
DNA (990bp) protein (330aa)
Helix-turn-helix, type 11 domain-containing n=1 Tax=Nocardioides sp. CF8 RepID=R7XTJ3_9ACTO
Helix-turn-helix, type 11 domain-containing {ECO:0000313|EMBL:EON22664.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
helix-turn-helix, type 11 domain-containing protein
S1-16-all-fractions_k255_5607577_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8404..9315)
DNA (912bp) protein (304aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Nocardioides sp. CF8 RepID=R7XTM0_9ACTO
Diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:EON22663.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
diacylglycerol kinase catalytic subunit
S1-16-all-fractions_k255_5607577_9
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9521..10804
DNA (1284bp) protein (428aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WVS2_9ACTO
S1-16-all-fractions_k255_5607577_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10801..12069
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XUZ0_9ACTO
phosphoribosylamine--glycine ligase
S1-16-all-fractions_k255_5607577_11
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12135..12719
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Acaricomes phytoseiuli RepID=UPI0003641464
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99554.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
S1-16-all-fractions_k255_5607577_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12724..14151
DNA (1428bp) protein (476aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Adenylosuccinate lyase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU17_9ACTO
adenylosuccinate lyase
S1-16-all-fractions_k255_5607577_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14156..15595)
DNA (1440bp) protein (480aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPV2_NOCSJ
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABL83837.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_5607577_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15700..15969
DNA (270bp) protein (90aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Acylphosphatase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU59_9ACTO
acylphosphatase
S1-16-all-fractions_k255_5607577_15
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15963..18869)
DNA (2907bp) protein (969aa)
Regulatory protein LuxR n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T7D7_MICAI
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ADL48129.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
S1-16-all-fractions_k255_5607577_16
unknown

Not on your lists

comp(18866..19063)
DNA (198bp) protein (66aa)

This feature has no annotations

S1-16-all-fractions_k255_5607577_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19260..19835
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XUY5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22825.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_5607577_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19855..20751
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU12_9ACTO
phosphoribosylaminoimidazole-succinocarboxamide synthase
S1-16-all-fractions_k255_5607577_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20781..21209
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPU8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83833.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_5607577_20
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21384..22949
DNA (1566bp) protein (522aa)
AMP-dependent synthetase and ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XUY0_9ACTO
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EON22820.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
acyl-CoA synthetase
S1-16-all-fractions_k255_5607577_21
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22949..23134
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036DABA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB25324.1}; Flags: Precursor;; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
S1-16-all-fractions_k255_5607577_22
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23166..23990)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4Y1_CELFA
Uncharacterized protein {ECO:0000313|EMBL:KGN39926.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
S1-16-all-fractions_k255_5607577_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23998..24693)
DNA (696bp) protein (232aa)
GntR family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XYP3_9ACTO
GntR family transcriptional regulator {ECO:0000313|EMBL:EON24408.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
transcription regulator, GntR family
S1-16-all-fractions_k255_5607577_24
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24826..26058
DNA (1233bp) protein (411aa)
Divalent metal ion transporter n=1 Tax=Nocardioides sp. CF8 RepID=R7XYF9_9ACTO
Divalent metal ion transporter {ECO:0000313|EMBL:EON24407.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_5607577_25
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26070..26843
DNA (774bp) protein (258aa)
UPF0271 protein CF8_1617 n=1 Tax=Nocardioides sp. CF8 RepID=R7XYL9_9ACTO
UPF0271 protein CF8_1617 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
LamB/YcsF family protein
S1-16-all-fractions_k255_5607577_26
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26840..27448
DNA (609bp) protein (203aa)
alpH; allophanate hydrolase (EC:3.5.1.54)
Allophanate hydrolase subunit 1 n=1 Tax=Nocardioides sp. CF8 RepID=R7XZH5_9ACTO
Allophanate hydrolase subunit 1 {ECO:0000313|EMBL:EON24405.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-16-all-fractions_k255_5607577_27
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27448..27591
DNA (144bp) protein (48aa)
Allophanate hydrolase 2 subunit 2 (EC:3.5.1.54)
allophanate hydrolase n=1 Tax=Streptomyces RepID=UPI00020000E7
Uncharacterized protein {ECO:0000313|EMBL:KJK12766.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
Displaying 27 items

View Taxonomy