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S1-16-all-fractions_k255_6706529

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_6706529_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..896
DNA (894bp) protein (298aa)
HNH endonuclease n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLN6_NOCSJ
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABL82721.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_6706529_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1535..1837
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNF9_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83344.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_6706529_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1876..2502
DNA (627bp) protein (209aa)
Membrane protein {ECO:0000313|EMBL:AJR18238.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
membrane protein id=4357914 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein
S1-16-all-fractions_k255_6706529_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2512..3531)
DNA (1020bp) protein (340aa)
Type I phosphodiesterase/nucleotide n=1 Tax=Nocardioides sp. CF8 RepID=R7Y047_9ACTO
Type I phosphodiesterase/nucleotide {ECO:0000313|EMBL:EON24941.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_6706529_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3662..4465
DNA (804bp) protein (268aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Glutamate racemase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y032_9ACTO
glutamate racemase
S1-16-all-fractions_k255_6706529_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4462..5232
DNA (771bp) protein (257aa)
Beta-lactamase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y103_9ACTO
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EON24945.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
beta-lactamase domain-containing protein
S1-16-all-fractions_k255_6706529_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5257..5916)
DNA (660bp) protein (220aa)
Response regulator receiver n=1 Tax=Nocardioides sp. CF8 RepID=R7Y051_9ACTO
LuxR family transcriptional regulator
Putative two-component system response regulator {ECO:0000313|EMBL:AIY16756.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S1-16-all-fractions_k255_6706529_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5904..7067)
DNA (1164bp) protein (388aa)
Histidine kinase, dimerization and n=1 Tax=Nocardioides sp. CF8 RepID=R7Y001_9ACTO
Histidine kinase, dimerization and {ECO:0000313|EMBL:EON24947.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
histidine kinase, dimerisation and phosphoacceptor region
S1-16-all-fractions_k255_6706529_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7317..8057
DNA (741bp) protein (247aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Nocardioides sp. CF8 RepID=R7XZW0_9ACTO
S1-16-all-fractions_k255_6706529_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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8054..8686
DNA (633bp) protein (211aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZR2_9ACTO
purine NTP phosphatase
S1-16-all-fractions_k255_6706529_11
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8936..11266
DNA (2331bp) protein (777aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000380E306
LuxR family transcriptional regulator fused with ATPase domain {ECO:0000313|EMBL:EOD64510.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
LuxR family transcriptional regulator fused with ATPase domain
S1-16-all-fractions_k255_6706529_12
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11432..13126
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037D84CF
Trehalose-6-phosphate hydrolase {ECO:0000313|EMBL:EFE70184.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
trehalose-6-phosphate hydrolase
S1-16-all-fractions_k255_6706529_13
unknown

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13123..13491
DNA (369bp) protein (123aa)

This feature has no annotations

S1-16-all-fractions_k255_6706529_14
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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13598..14314
DNA (717bp) protein (239aa)
Glycoside hydrolase family 48 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULA5_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KHL11178.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
glycoside hydrolase family protein
Displaying 14 items

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