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S1-16-all-fractions_k255_5528114_10

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(7997..8833)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 275.0
  • Bit_score: 359
  • Evalue 8.50e-97
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 275.0
  • Bit_score: 359
  • Evalue 4.20e-96
tRNA pseudouridine synthase A n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNI4_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 275.0
  • Bit_score: 359
  • Evalue 3.00e-96

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 837
GTGCGCCTGCGGATCGACTGTGCCTACGACGGCACCGAGTTCTCCGGATGGGCCAGCCAGCCGGGCCTGCGGACCGTGCAGGCGCTGCTCGAGGACGCACTGGCCACCGCCCTGCGGGTCCCGCAGGCCAGGGTCACCGTCGCCGGGCGGACCGACGCCGGCGTGCACGCACGCGGCCAGGTCGCGCACCTCGACGTCGATGCCGAGGTCGTCACAGCGTCGGCGGGGCGGGCAGCCGAGGCACCGCTGGACGCGCTGGCGCGACGGGTCGACGGGATCCTGCCCGCAGACCTGTGCGTACGCCGGATCTCCGAGGCGCCGGAGGGGTTCGACGCCCGGTTCTCCGCGATCTGGCGTCGCTACGCCTACCGGATCGCCGACACCCAGGAGCTGGCCGACCCCCTGCTGCGCAGCCATGTCCTCAGGTGGGGTCGCCGGCTGGACCTCGAGGCGATGAACGTGGCCTCTGCCCCGCTGGTCGGGCTGCAGGACTTCGCGGCCTTCTGCAAGCAGCGTCCGGGAGCCACCACGGTGCGGACGCTGCTCGAGCTGTCCTGGACCCGTGACGAGGCCGGCCTCGTCGTCGGTTCCGTCCGGGCGGACGCGTTCTGCCACAACATGGTCCGCGCCCTCGTCGGCTCGCTCATCAGCGTCGGCGAGGGACGGCGGCCGGCGACCTGGCCGGCCGAGGTGATGGCCGGACGCCGTCGCGACGCCGGCGTGCACGTCGTACACGCCCATGGCCTCACGCTGGAGGAGGTCGGCTACCCCGAGGGGGACGAGCTGGCCGCCCAGGCCGGTCGGGCCCGAGCCAGACGAGAGGCGATCGATGCCTGA
PROTEIN sequence
Length: 279
VRLRIDCAYDGTEFSGWASQPGLRTVQALLEDALATALRVPQARVTVAGRTDAGVHARGQVAHLDVDAEVVTASAGRAAEAPLDALARRVDGILPADLCVRRISEAPEGFDARFSAIWRRYAYRIADTQELADPLLRSHVLRWGRRLDLEAMNVASAPLVGLQDFAAFCKQRPGATTVRTLLELSWTRDEAGLVVGSVRADAFCHNMVRALVGSLISVGEGRRPATWPAEVMAGRRRDAGVHVVHAHGLTLEEVGYPEGDELAAQAGRARARREAIDA*